Hevea brasiliensis (rubber tree): 110667210
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Entry
110667210 CDS
T05150
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110667210
03036 Chromosome and associated proteins [BR:
hbr03036
]
110667210
Transcription machinery [BR:
hbr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110667210
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
110667210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
SPT6_acidic
HHH_7
HHH_9
Spt6_S1
Tex_central_region
HTH_44
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
110667210
NCBI-ProteinID:
XP_021683685
LinkDB
All DBs
Position
Unknown
AA seq
1655 aa
AA seq
DB search
MMKDSKRKLVLIDEDDEHDDGVQVMDRKGENVILEDEDEEDDEDDLDEFENDGFIVDDEE
EEEGEQGGKDRQKRKKKKKRKLVKDVILDDDDFELLRENKISGVVHSYNVGNEKFKRLKK
AESSKNTADFGFSDDDASLYDGDAEEEEAVSSDKDDEMADFIVFDELGDKKGVPRQQRLR
ENKPQQVTLASSLEEAGCTFGNTDEILKRHLVKIVKPDDFNEFELDNYTTMRDYSIIKEN
DVPERMQIFEEISGPAPVDEMSRDQESSWILNQLAANIHILLCKKKAQEESVMNIDLLEK
INKEDIMRFLELRHLEKYDIPFIAMYRKEKCLSLLQDLEEDDIENKYDNDGIEGTRLKWH
KILWAVNELDKKWLLLQKRKNALETCYNKRYEEESCTASDVVKFRWLEQQFDTIMKSLKL
AETETDINDLDMKFMLHFPPPEEGVVSKFKLPKRRSEYSNCSKAGLWKLARKFGCSSEQF
GLHLTLEKVGMEFWEDPVESPDVMASDFTCPMFETPEAVLNGARFMAAMEISCEPCVRKH
VRRIFMDKAVVSTCPTQEGDKTIDSFHLFYGVKWLRDKPLDQFQEAQWLLILKAEEEKLL
QVTINLPENVMNKLVTDSQEIYLTGSSHGSARLWDEQRKLIIQEAFLKVLLPSLEKEARA
LLITRAKSWLLMEYGKQLWNRVSIAPYQQKEYAAGQEEGIAPRVVACCWGPGKPPITFVM
LNSSGQLLDVLETRSLSLRSQDVIDQQRKKYDQQRVFKFILNHRPNVIVLGAANVCCTWL
KDDIEEIILQVEENTTDIGQMIDKINIVYGDESFAQLYENSKISSSQLPGQQGIVRRAVA
LGRYLQNPLAMIATLCGPQKDIVSWKLNSLEHFLTPVEKYDMIEMVLVDVTNQVGMDVTF
TMSHDWLLAPLQFVSGLGPQTAAFLHRDLIGGKMVNNRYDLADCGLTSKKIFYNAVGFLR
VRGNQLLSATNEFGLLDDTRIHPESYGLAESLSKAVHNDVAQTQPLTYIKNNPQLLNDFD
IDDYADNYAIEQGENKRETLHDIKNELLHGFLDPRKPYEKPTKDELFFLISGKNEDAFAE
GRIIQVTVRRVLSQRAFCALDFGLTGVIMKDDFLDGTDDFSLTDKLHEGDVVTCKIKQLE
KSRFQVLLTCKESELKSCRYQNFREIDPYYHEGKNKLLRQQGEACKNDLAKKQSKQRTIN
HPRFKNITGDEAMEFLSDKEIGEYVFHPSPRGVYYLVLTLKVYDGVYAHKDIIEGQKDHR
DIKSLLHIGKKLKIGDSIFGDLDEVMDQYVNPLVTHLKTMINFKKFMRASEAEVDELLRA
EKSEHPMRIVYCFGISYKHPGNFILSYIRTNLRHEYIGVQPEGFKFRRQIFGKIEQVVAY
FQRHIDDLLHGPTLTGNSSSGYSTGASMGSGNEGWQGQLNSTRDEPSTTGSRGRKYYSRD
GDERNSRPGGLPLPNGGRGHGRGAGRGRGRGRGRGRGRGPGRVSSDNEPSDSSNRNGDSW
NGNGLGGRSWQGQVHGNSWNGSDFGCNWSTNPKDKGVDGDGKRMFSEGNGSGGSWGANPS
GGNSWNLSGKAGNDDGANLGRNGTDSQGILGSGAASGNDWLVGSSNFGGNCGWGNKNSSG
GSGGGFNNDTEAGTTGWGSKSGKSSSFTGGGSGWS
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggattccaagaggaaactcgtgttaatcgatgaagatgatgaacacgatgat
ggagtccaagtaatggacagaaagggagagaatgttattctagaagatgaagacgaagag
gatgatgaggatgatttggatgagtttgagaatgatgggtttatagttgatgatgaggag
gaagaggaaggcgaacaaggtgggaaagacagacaaaaaaggaagaaaaagaagaaaagg
aaactagtaaaggatgtgattcttgatgatgatgattttgagttgctccgagaaaacaaa
atctctggcgtagtacactcctataatgtcggaaatgaaaagttcaagcggctcaaaaaa
gctgaatcttctaagaacacagctgattttgggttttctgatgacgatgcttcattatac
gatggtgatgctgaagaagaggaagctgtgtccagtgataaagatgatgaaatggcagat
ttcattgttttcgatgaattaggagacaagaaaggggtcccaaggcaacaaaggttgaga
gaaaataagccacagcaagtaacattggcttcatctctagaagaagctggctgcacgttt
ggcaacacagatgaaattctaaagcgtcatctagttaagattgtcaaaccagatgacttt
aatgagtttgagctggataattatacaactatgagggattacagtataattaaggagaat
gacgtgcccgagaggatgcagatatttgaagaaatttctggaccagctccagttgatgaa
atgagtagagatcaggagagttcttggatacttaatcaacttgctgcaaatatacatatt
ctgttgtgcaagaagaaagctcaggaagaaagtgtgatgaacatagatctacttgagaag
attaacaaggaagatatcatgaggtttctggaattgcgtcatctggagaagtatgacatt
ccatttattgctatgtatcgaaaggaaaagtgccttagtctgttgcaagatctcgaggaa
gatgacatagaaaacaaatatgataatgatggaatagaaggtaccagactgaagtggcat
aagattctctgggctgtgaatgaactggacaagaagtggttgcttcttcagaagcgaaag
aatgcgcttgagacgtgttacaacaaacgttatgaagaggaaagttgcactgctagtgat
gtggtgaagtttcgttggcttgagcagcaatttgatacaataatgaagtctctaaagctg
gctgagacagagacagatattaatgatttggacatgaagtttatgttgcattttcctcca
cctgaagagggcgtcgtaagcaaattcaagttgccaaaaaggagatcagaatacagtaac
tgtagcaaggctggactatggaagcttgcaaggaagtttggatgcagttctgagcaattt
ggattgcatcttacactagaaaaagtgggaatggaattttgggaagatcctgttgaatct
ccagacgtaatggcttcagattttacatgtccaatgtttgaaactcctgaagcagtgctt
aacggtgctaggttcatggctgcaatggagataagctgtgagccatgtgtcaggaaacat
gttcgtagaatttttatggataaagctgtagtatccacctgcccaacccaagaaggagac
aagacaatagattcttttcatctattttatggggttaagtggctgagagacaagccactt
gaccaatttcaagaagcacagtggcttcttattcttaaagcagaagaggagaagctcctt
caagttaccataaacttaccagaaaatgttatgaataagttggtcaccgactctcaagaa
atttatcttactggcagtagtcatgggtctgctcgactatgggatgagcaacgcaagtta
ataattcaggaagcatttttaaaggttcttcttccttcattggagaaagaagctcgagcc
ttgttgatcaccagagcaaagagttggctgcttatggaatatggaaagcaattgtggaac
agagtgtcgattgcaccatatcagcagaaggaatacgctgctggacaggaggaaggtatt
gcaccaagagtcgtggcttgctgctggggtcctggaaagccaccgattacatttgtaatg
ttgaattcatctggacaattgcttgatgtgttggaaaccagatcccttagcctgcggtca
caggatgttattgaccagcaacggaagaaatatgaccagcaacgtgtcttcaagttcata
ttaaatcataggccaaacgttatagtccttggtgctgctaatgtgtgttgcacatggttg
aaggatgatatcgaggagattatacttcaggtggaagaaaacactacagatattggccaa
atgatagataaaatcaacattgtttacggagatgaatcatttgctcagctttatgaaaat
tcaaagatttcatcatcccaactgcctggacaacaaggcattgttagacgagctgtggct
ctagggcgttacctccaaaatccgttggctatgattgcaacactgtgtggacctcagaaa
gatattgtttcttggaagcttaactccttggagcattttctgactcctgttgagaagtat
gacatgattgaaatggtattggtggatgttaccaatcaggtaggcatggatgtaactttt
acaatgagccacgactggcttttagctcccctccaatttgtctctgggcttggtcctcaa
acagcagcctttctacatagggacttaattgggggtaaaatggttaacaatcgatatgat
ttggcagactgtggattgacatcaaagaagattttctataatgcagtaggctttttgcgt
gtccgtggtaatcagctgctttctgctaccaatgaatttggtctattggatgatacaaga
attcaccctgagtcatatggtcttgctgaaagtttgtctaaggctgtccataatgatgtt
gctcaaacacagcccctaacatacattaagaacaatccacagctgttgaatgactttgat
attgatgattatgctgataattatgcaatagaacagggagaaaacaaaagagaaactctt
catgatataaaaaatgaactgctgcatggatttctcgatcctcgtaagccttatgaaaaa
ccaactaaggatgagctattctttttgatatcaggcaaaaatgaggatgcattcgctgaa
ggaagaattattcaggttactgttcgccgagttctatcacaacgagcattttgtgctctt
gactttggattgactggagtaataatgaaggatgattttttggatgggactgatgatttt
tctttgacagacaagttacatgaaggtgatgtcgttacttgcaagattaaacaacttgaa
aagagtagattccaagtgcttctaacttgtaaagaaagtgagctgaagagttgcagatat
caaaattttcgtgagattgatccttactatcatgaaggcaagaacaaattgttaagacag
caaggtgaagcctgcaagaatgaccttgcaaagaaacagtccaagcagaggactattaat
catccacgctttaaaaatatcactggggacgaggcaatggagttcctttctgacaaggag
attggtgaatatgtttttcatccaagtccaagaggcgtctattatttggtactaactctg
aaagtctatgatggagtttatgctcacaaagacatcattgaaggtcagaaggaccataga
gatatcaaaagcttgctccatattgggaaaaaattgaagataggagatagcatttttggg
gatttagatgaggttatggatcaatatgttaatccattggtaactcaccttaagacaatg
ataaacttcaaaaaatttatgagggcttcagaggcagaggttgatgagctcttaagagct
gagaagtcagaacatccaatgaggatagtttactgttttggtatttcttataagcatcct
ggcaatttcatcttgtcctacataagaacaaacctacgtcatgaatatattggtgtgcag
cctgagggattcaaatttaggaggcagatttttgggaagattgaacaggttgtggcatat
ttccaacgacacattgatgatttactgcatggcccaacactaacaggaaattcctcatct
ggttattccactggagcatccatgggcagtggtaatgaaggttggcaaggccagttaaat
tcaaccagagatgaaccttcaaccactggctccagaggcagaaaatattatagtagagat
ggagatgaaagaaatagccgtccaggtggattgcctctgccaaatggtggccgtggccat
ggacgtggggctggacgaggacgaggacgaggacgaggacgaggacgtggacgtggacca
ggacgtgtctctagtgataatgagccatctgacagcagcaaccgaaatggagatagctgg
aatgggaatggccttgggggcagaagctggcaggggcaggtgcatggcaacagttggaat
ggaagtgattttggatgtaactggagcacaaatcctaaggataaaggtgtggatggtgat
ggaaagagaatgttttctgagggtaatggaagtggtggaagttggggtgccaacccttct
ggtggaaacagttggaatctgtctgggaaagctgggaatgatgatggagccaacctaggc
aggaatggtactgattcacagggtattctcggaagtggtgctgcaagcggcaatgactgg
ttggttggaagcagtaactttggtgggaattgtgggtggggaaataagaacagctctggt
ggtagtggaggtggttttaacaatgatacagaggctgggactactggatggggttctaaa
tctgggaagagctcctctttcacaggtggtgggagtggatggtcctga
DBGET
integrated database retrieval system
