Hevea brasiliensis (rubber tree): 110667319
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Entry
110667319 CDS
T05150
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03022
Basal transcription factors
hbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110667319
09124 Replication and repair
03420 Nucleotide excision repair
110667319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110667319
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110667319
Transcription machinery [BR:
hbr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110667319
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110667319
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Zn_ribbon_GTF2H2
IBR
VWA
Tfb4
Motif
Other DBs
NCBI-GeneID:
110667319
NCBI-ProteinID:
XP_021683818
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MSTGEKKRLNGEAEEDDDVDVDGDGLDAWERTYTDERSWEALQEDESGLLRPIDNKAIYH
AQYRRRLRSLSTTAVRIQKGLIRFLYIVVDLSRAASEMDFRPSRMVVIAKHVEAFIREFF
DQNPLSQIGLVTIKDGVAHPLTELGGSPESHIKALMGKMECSGDSSLQNALDLVCGYLDQ
IPSYGHREVLILYSALSTCDPGDITETIQKCKESKIRCSVIGLSAEMFICKHLCQETGGL
YSVAMDEAHFKELMLEHAPPPPAIAEFAIANLIKMGFPQRAAEGSISICSCHKEAKVGDG
YICPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIAPFDGVSPRQNELLNRPVKT
CFGCQQSLLNPGNKPGLSVVCPKCKQYFCVDCDIYIHESLHNCPGCESFRHS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaggtgaaaagaagcgattgaatggagaagctgaagaagatgatgatgttgat
gtagatggtgatggacttgatgcgtgggagaggacttacactgatgagaggtcatgggag
gctctgcaagaggatgagtcaggactgcttcgccctatagacaataaggccatctaccat
gctcagtatcgccgacgccttcgttccctgtctaccactgctgttcgcatccagaagggc
ctcattcgctttctttacatcgttgttgatctctccagggcagcatcagagatggatttt
cgaccaagtcgaatggttgtgatcgcaaaacatgttgaggcttttattagggagtttttt
gatcagaatccacttagccagattggtttggtgactataaaagacggggttgcccatccc
ttaacagagcttggtggtagtccagagtcccatatcaaggctttgatggggaagatggaa
tgctcaggtgattcctcactacagaatgccctagaccttgtctgtggatatcttgatcag
attccatcatatggtcatcgtgaggttctgatcttatattcagccctcagtacctgtgat
ccaggagatataacggagaccatccagaaatgcaaggaatctaaaataaggtgctcagtt
attggtctttctgcagaaatgtttatatgcaaacacctctgtcaagaaactggtggatta
tactctgttgcaatggacgaggcccactttaaagagttaatgctggagcatgcaccacca
cctccagcaatagcagaatttgcaattgctaacttgatcaagatgggtttcccacaaagg
gcagcagagggctctatctctatatgttcttgtcataaagaagctaaggttggcgatggt
tacatttgtccgagatgcaaggcacgtgtatgtgagcttcctactgaatgccgtatttgt
ggattgacactcgtttcttcacctcatttggcaaggtcatatcatcatctcttccctatt
gcgccatttgatggggtgtctccacgacaaaatgaactacttaacagaccagtgaaaact
tgttttggctgccaacagagcctcctcaatcctggcaacaagcctggcctttctgttgtt
tgcccaaaatgcaaacagtacttctgtgttgattgtgatatttacattcatgagagcttg
cataactgcccaggctgcgagagtttcagacattcatag
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