KEGG   Hevea brasiliensis (rubber tree): 110667410
Entry
110667410         CDS       T05150                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1 isoform X1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110667410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hbr03021]
    110667410
Enzymes [BR:hbr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     110667410
Transcription machinery [BR:hbr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     110667410
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3
Other DBs
NCBI-GeneID: 110667410
NCBI-ProteinID: XP_021683932
LinkDB
Position
Unknown
AA seq 2035 aa
MEDNVQSTILEGEIVGIRFGLATHKEISTASVSDCPISHSSQLTNPFLGLPLEFGKCESC
GTSEPGKCEGHFGYIELPIPIYHPSHVSELKRLLSLLCLKCLKMKTNKFQVKSNGVAERL
FSCCEEASQISIKEIKTTDGAFFLKLKLPSRMRLRDGFWNFLERYGFRYGDDITRTLLPC
EVMEMLRRIPQETRKKLARKGYFPQDGYIMRYIPVPPNCLSVPDISDGVSVMSSDLSISM
LKKVLKQVEIIKSSRSGPANFESHEVEAVDLQSAVDQYLQVRGTARASRDIEARFGVHKE
SNDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGIPFEIAQRITFEERVNVH
NIKYLQELVDNKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDTVFINRPPTT
HKHSLQALSVYVHDDHSVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQ
LLSSHSGNLNLQLTSDSLLSLKTMFKAYFLDKAAAQQLALFVSSSLPQPALWKVHSGPFW
TAPQILQTALPSQFDCNGERYWISKGDIVKVDFSRDIVQAVINEVVISIFFEKGPDAVFK
FFNSLQPLLMENLFSEGFSVGLEDFYISRASIESIHRDLNVISPLLGHLRSSYNGLLELQ
LENHIWHAKLPAADFILRSSSLGDLIDYKSDSAMTKLVQQIGFLGLQISDRGKFYSKTLV
EDMASHFESKYPSDLVDYPSAQYGLIQSCFFHGLDPYEEMVHSISTREVIVRSSRGLSEP
GTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNSGIKAQSLFPAGEPVGVLAATA
MSNPAYKAVLDSTPSSNSSWELMKEILLCRVNFKNDLTDRRVILYFNDCDCGRSYCQEKA
AYLVKNHLGRVILKDIAECFMIEYKRRQTIADASLVGHIHLKKKKLQELNVGMEVILQKC
KEMITSFRKKKKLAPLFKRIEVSFSECCSFQQSCADEWSSMPCLMFFWLDHDIHLENISN
IFSDVVCPVLLETIIKGDHRISSANIIWVSPDTTTWIRNPSRTQKGELALDVVIEKSAVK
QSGDAWRIVLDSCLPVLHLIDTTRSIPYAIKQVQELLGVSCAFDQAVQRLSTSVTMVAKG
VLKEHLILLANSMTCGGNLVGFNSGGYKSLSRSLDIQVPFTEATLFTPRKCFERAAEKCH
VDTLSSIVASCSWGKCVAVGTGSRFDLLWDQKEACLNQEGRIDVYEFLNMVRSGADGEES
VTACLGAEVDDLMLEDEIDWNLSPENNFGSDKPSFEETDEFQEKPWSSWGSDIAETENAL
STKAQEQSDKSSGWDTAATWQKNANEKTKNNNDETNPWSGWGTRKMEASDLPAMKVQKKS
DLSSSWDTAAAWKTTVSGSTEKNGAEANSWSGWGMRKTESPDAPAMKPQEETGRPSDWDD
GATWEKRAEDDVQLENHSTTVLKSNTLSGWGAEKARMQDTISTHQEEFAGSSGWNAGTSW
GKGGKDSEKTNESNTSNSNSWSAWDNEVTENQLISGRVSSTAEDWSKDKHPTQAVQHLES
HVNSSSWGKPKSPEVSRGWDSPKESVRARSSQGWGLPDSGAAKSPEVSHGWGTPKESVEA
GSSHDWGLPDSESAKSPEVSHGWGLSKESIKAASSQGWGLQTSGAAKSSEVSHGWGAPKE
SVKAGSSQDWGLPDSESARSPEVSQGWGLPKESVKAASSQGWGLQTSGASPEVSQGWASP
KESDKAANSQGWGLPNSRASPEVSQGWGSAKESVKAASSQGWGLPDSEASNGSDRQQQWG
QQSGEFKKKRAEGSRGWGSKSGDWKGKNRPAKSPGNVHDDSSMSGMFTATRQRLDVFTSQ
EQDILSEIEPLMRSIRRIIHLSGYNDGDPLSAADQSYVLDNVFNYHPDKVAKMGAGIDHV
TVSKHSSFQESRCFYVVSTDGSKQDFSYRKCLENFIKGKYPDLAEEFIDKYFTKPRARSN
RQQQNSVSERTGDENQQQNPESGRTLDDKQQQNPASERTLDDNQPQNPIVEGNAE
NT seq 6108 nt   +upstreamnt  +downstreamnt
atggaggacaatgttcaatctaccattttggagggggagatagttggaatcagatttggt
ttggcaactcataaggaaatatctacggcttctgttagtgactgccctataagccattct
agtcagcttacaaatccattccttggcttgccgcttgaatttggtaaatgtgagtcttgt
ggcacatctgaacctggaaaatgtgaaggtcactttggttatattgaattgccaatacca
atatatcatccaagtcatgttagcgaattgaagcggttgttaagcttattatgcttaaag
tgcttgaaaatgaaaacaaacaagtttcaggttaagagcaatggtgtggctgaacggttg
ttttcatgttgtgaggaggcttctcaaatttctattaaagagattaaaacaacggatggt
gctttttttttgaaattgaagctaccatctaggatgagattgagagatggtttttggaat
ttcttagaaagatatggttttcgctatggtgatgacattactcgaacgttgcttccttgt
gaggtgatggaaatgcttaggagaattccacaagagactagaaaaaaacttgctagaaaa
gggtattttccgcaggatggttatatcatgcgatatataccagttccaccaaactgtttg
tcagttccagacatttctgatggtgttagtgtcatgtcctctgatctttctatatccatg
cttaagaaagttcttaagcaagttgagataatcaaaagctcacgatctggtccagcaaac
tttgaatcccatgaagttgaagccgttgatttgcagtcagcagtcgatcaatatcttcaa
gttaggggtactgcaagagcatctcgggatattgaagcaagatttggggtacacaaggag
tccaatgattcctcaaccaaagcatggcttgagaaaatgaggactttgttcatcagaaag
ggttctggattctcttcgcgcagtgtgattacaggtgatgcatacaaacgtgtgaatgag
attgggatcccttttgaaattgctcagagaatcacgtttgaggagagggttaatgtgcac
aacatcaaatatcttcaagagcttgtggacaacaagttgtgcttgacatacaaggatgga
tcttccacttattcactcagagaaggttccaagggacacacatttcttcgtccaggtcag
attgtccatcggcgaataatggatggagatacagtcttcatcaatagacccccgacaaca
cacaagcattctttgcaagcactgtctgtttatgtgcacgatgatcactctgtgaagatc
aatcctcttatttgtgggccgttaagtgctgattttgatggtgattgcattcatctattc
tatcctcagtcccttgctgcgaaagcagaagtcttggaattgttttcagttgagaaacag
ttgcttagctctcatagtggcaatctgaatttgcaattgacctcagattctcttttatcg
ttgaagaccatgtttaaggcatacttcttggacaaagcagccgctcagcaattagctttg
tttgtatcatcttctttgccacagcctgccttatggaaagttcactctggcccattttgg
actgctccacagatactacagactgctttgccttctcagtttgactgcaatggggaaaga
tactggatcagtaaaggggacattgtaaaggttgattttagtagggatatcgtgcaggct
gttattaatgaagttgtgatctctatcttttttgagaaaggtcctgatgctgttttcaag
ttcttcaactctctgcagcctttgttaatggaaaatctgttttctgaaggttttagtgtt
ggcttggaggacttctacatatctagggcttccatagagagtattcatagagatttgaat
gttatttctcctttgcttggtcacttaagatcaagctacaatgggctgttggagttgcaa
ttggaaaatcacatctggcatgctaaactaccagctgcagattttattttaaggtcttct
tccctgggtgatttaattgactataagagcgattcagccatgaccaaattagtccaacag
attggcttcttgggcctgcaaatttcagatagggggaagttctattctaaaacattggtt
gaagacatggcttctcattttgagagcaaatatccttctgatttagttgattatccatct
gcacagtatgggttgattcaaagctgtttttttcatgggttagatccgtatgaagagatg
gtccattcaatatctacaagagaggttattgttcgctcatcgagaggattatctgaacct
gggactttattcaagaacttgatggctatccttagagatgtggttatttgttatgatgga
actgtgaggaatgtatgcagcaattcaatcatccagttcgagtatggagtaaattctgga
attaaggcacagagtttattccctgcgggtgaacctgtgggtgtgttagctgcaactgct
atgtccaatcctgcatacaaagcagttcttgattcgactccaagtagcaactcctcatgg
gagttgatgaaggaaatacttctttgcagagttaacttcaagaatgatcttactgatcgc
cgcgtcattttgtattttaatgattgtgattgtgggagaagttactgtcaggaaaaagcg
gcctacttggtgaagaatcatttggggagagtcattcttaaagacattgcagagtgtttt
atgatcgaatacaagaggcggcaaacaatagcagatgccagtctcgttggccatattcat
ctcaaaaagaagaagttgcaagaattgaatgtgggtatggaagttattcttcaaaagtgc
aaagagatgatcacttcatttcgaaagaagaaaaagcttgctcctttatttaaaaggata
gaggtgtctttcagcgaatgttgctctttccagcaatcttgtgctgatgagtggtccagc
atgccgtgcttgatgttcttttggctagaccatgatattcatttggagaacatttcaaat
atcttctctgatgtagtttgtccagtcttgttggagacaatcatcaaaggtgatcatcga
atttcctctgcaaacattatttgggttagtccagatacaacaacttggataagaaatcct
tccaggactcagaagggggaactggccctggatgttgttattgagaaatcagctgttaaa
cagagtggtgatgcatggagaattgtcctagattcctgccttcctgttcttcatttgatt
gataccacacgttctataccatatgcgattaaacaagttcaggaattgttgggagtttct
tgtgcatttgatcaagcagttcagcgcctctcaacctcagtaacaatggtggcaaaaggt
gtgctcaaggagcacctcattctcctggcaaacagcatgacatgtggtggaaatttggtt
ggcttcaattctggtggctacaaatcactatctcgctcattggatatccaagtaccattt
actgaggcaacactctttaccccaagaaaatgttttgagagagctgcagagaagtgtcat
gtggatactttatcgagcatagttgcttcttgttcgtggggtaagtgtgtggcagttggt
acaggatcacgatttgatttgctttgggaccagaaggaggcctgtttgaatcaagagggt
agaatagatgtttatgaatttttaaatatggtgagaagtggtgcagatggagaagaatca
gtcactgcctgtttaggtgcagaagttgatgatcttatgttggaggatgaaattgactgg
aacttgtctccagagaacaattttggttctgataagcccagctttgaagaaactgatgaa
tttcaagaaaagccctggtctagctggggaagtgatatagctgaaacagaaaatgcactc
tccacaaaagcccaggagcaatctgacaagtccagcggttgggatactgcagctacttgg
cagaaaaatgcaaatgaaaagacaaaaaataacaacgatgagacaaacccatggtctggt
tggggaacaaggaaaatggaagcatctgatctccctgctatgaaagtgcaaaaaaaatct
gacctgtccagcagttgggatactgcagctgcttggaagacaactgtcagtggaagtact
gagaaaaatggagctgaggcaaactcttggtctggttggggaatgaggaaaactgaatca
cctgatgcccctgcaatgaaacctcaagaagaaactgggaggcccagtgattgggatgat
ggtgctacctgggagaaaagggctgaagatgatgttcagttggagaatcatagcacaact
gtgttgaagtcaaatacattgtctggttggggtgcagagaaagctagaatgcaagatacc
atctctacacatcaagaagaatttgcaggttccagtgggtggaacgctggtacttcctgg
gggaaggggggtaaagatagtgagaaaacaaatgagtcaaatacatcaaattcaaattct
tggtctgcgtgggataacgaggtaactgagaatcagttgatatctggtagggtttcttca
actgctgaagactggagtaaggacaaacatccaactcaagcagttcaacatttggaatca
catgtcaacagtagcagttgggggaaacccaagtcacctgaagtttcacgtggctgggac
tcaccaaaagagtctgttagagcaagaagttcccaaggttggggcctgccagattcagga
gcagccaagtcacctgaagtttcacatggctggggcacgccaaaggaatctgttgaagct
ggaagttcccatgattggggcctgccagattcagaatcagccaagtcacctgaagtttct
cacggctggggcttgtccaaagagtctattaaagcagcaagttcccagggatggggactg
caaacttcaggagcggccaagtcatctgaagtttcacatggctggggcgcgccaaaagaa
tctgttaaagcaggaagttcccaggactggggtctgccagattcagaatcagccaggtca
cctgaagtttcacaaggctggggcttgcccaaagagtctgttaaagcagcaagctcccag
ggatggggactgcaaacttcaggagctagccctgaagtttcgcaaggctgggcctcgccc
aaagagtctgataaagctgcaaattcccagggttggggcctgccaaattccagagccagc
ccagaagtttcacaaggctggggctcagccaaagagtctgtaaaagcagcaagttcccag
ggttggggcttaccagattcagaagccagcaatgggagtgataggcaacagcaatgggga
caacaaagtggagaatttaagaaaaaaagagctgaaggatcaagaggttggggttcaaaa
agtggagactggaaaggcaagaaccgccctgccaagtcacccggaaatgtccatgatgat
tctagtatgagtgggatgtttacagcaaccagacagaggttggatgtgtttacttctcaa
gagcaggatattctctctgaaattgagccattaatgcggtctatcagaagaataatacat
ctatctgggtacaatgatggggatccactgtctgctgctgaccagtcatatgtacttgat
aatgtcttcaactatcatccagataaagtggcaaagatgggtgccggcattgatcatgtc
acagttagcaagcacagcagtttccaggaaagcaggtgcttctatgtcgtttcaactgat
ggtagcaaacaggatttttcctaccgtaaatgcctagagaacttcatcaaggggaagtat
cctgacttggctgaggaattcatagataaatatttcactaaacctcgtgccagaagcaac
cgccagcagcaaaactctgtttcagagaggactggggatgaaaaccagcaacaaaaccct
gaatcagggagaactcttgatgacaaacagcagcaaaaccctgcatcagagagaactctg
gatgacaaccagccgcaaaaccccattgtggagggaaatgcagaatga

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