Hevea brasiliensis (rubber tree): 110667424
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Entry
110667424 CDS
T05150
Name
(RefSeq) sm-like protein LSM5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
hbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110667424
09123 Folding, sorting and degradation
03018 RNA degradation
110667424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110667424
03041 Spliceosome [BR:
hbr03041
]
110667424
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110667424
mRNA degradation factors
5'-3' decay
Lsm complex
110667424
Spliceosome [BR:
hbr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110667424
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF7452
Ntox4
Motif
Other DBs
NCBI-GeneID:
110667424
NCBI-ProteinID:
XP_021683952
LinkDB
All DBs
Position
Unknown
AA seq
87 aa
AA seq
DB search
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR
RITKLDQILLNGNNIAILVPGGSPDPE
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggccaataatccctctcagctccttccatcagagctaattgacaggtgcatagggtcg
aaaatatgggtgataatgaaaggagacaaggagctcgttggtactctcagaggcttcgat
gtctatgtaaacatggtcctcgaagatgtcactgaatatgaaatcacagctgaagggcgg
cgaattaccaagcttgatcagatactactaaatgggaacaacatcgccattctggttcct
ggtggttcccctgatccagaatga
DBGET
integrated database retrieval system