Hevea brasiliensis (rubber tree): 110667670
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Entry
110667670 CDS
T05150
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbr03021
]
110667670
03036 Chromosome and associated proteins [BR:
hbr03036
]
110667670
Transcription machinery [BR:
hbr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110667670
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
110667670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HHH_3
HTH_44
HHH_9
SH2
ANF_receptor
Tex_N
MRP-S34
Motif
Other DBs
NCBI-GeneID:
110667670
NCBI-ProteinID:
XP_021684274
LinkDB
All DBs
Position
Unknown
AA seq
1617 aa
AA seq
DB search
MGKNIVSDEEDEVELEDYDREPVDADAVDHEDDDEEDEEGQDEYEKDDFIVDDVEEEEEV
DEEEERADSDEERHKKRKKKKKRESEDVLDEDDYELLRDNNAFHHRPKDSKKFKRLKKAQ
RDSDEERFGFSDEEFDGSGKGGRTAEEKLKRTLFGDDEGVPLEDIAEEEQEAEEEEDGDI
GEEDEMADFIVDEEVDENGAPMRRKKLKRKKSRQAPGVTSSAIQEAQELFGDVDDFLLRR
KRDLESSEWKETRLDKEFEPTVLSEKYMTEKDEEIRMTDIPERMQISEEGTGSPPTDEIS
ITEEGSWIYNQLANGTVPLFRKRRDEAHEEEQDLPLNRDDIIRFLELHHVQKLDVPFIAM
YRKEECSSLLKDPENLEVDDENHDKSDRAPMLKWHKVLWAIQDLDRKWLLLQKRKTALEL
YYNKRFEEESRRIYDETRLNLNQQLFVSILKSLKDAESEREVDDVDAKFNLHFPPGEAGV
DEGQYKRPKRRSQYSTCSRAGLWEVASKFGCSAEQLGMGLSLEKMGEILENAKETPEEMA
SNFTCAMFETPQAVLKGARHMAAVEISCEPSIRKYVRSMYMENAVVSTSPTPDGNVAIDS
FHQFAGVKWLREKPINKFEDAQWFLIQKAEEEKLLQITFKLPEKYMNKLIGDCNEHYLSD
GVSKSAQLWNEQRTLILKDALYTYLLPSMEKEARSLLTSRAKSWLLWEYGKALWNKVSVG
PYQRKENDVSSDDEAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYAGSLTLRSQNIND
QQNKKNDQQRVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDE
LSIVYGDESLPRLYENSRISSDQLAGQPGIVRRAAALGRYLQNPLATVATLCGPAREILS
WKLSSLENFLNPDEKYAMVEQVMVDVTNQVGLDINMATSHEWLFAPLQFIAGLGPRKAAS
LQRSLVRAGAIFTRKDFVTVHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHP
ESYGLAQEMAKDVYEMDNGDTNDDDEALEMAIEHVRDRPNLLKNLDLDVYLHDKKRENKK
ETFKYIQLELIQGFQDWRKQYKEPSQDEEFYMISGETEDTLAEGRIVQATVRRVQGGRAI
CVLESGLTGMLTKEDYADDWRDMPELSDRLHEGDILTCKIKSIQKNRYQVFLVCREREMR
SNRYQQVRNLDPYYHEDRSSLQSEQEKARKEKELAKKHFKPRMIVHPRFQNITADEAMEF
LSDKDPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIG
EDTFEDLDEVMDRYVDPLVAHLKAMLSYRKFRRGTKAEVDEQLRIEKSDYPMRIVYSFGI
SHEHPGTFILTYIRSTNPHHEYVGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPMHESAP
SIRSVAAMVPMRSPATGGSSGASTGSGWGGSANDGGWRGQSFDRDRSSVPGARTGRNDYR
SRDSHQSGLPRPYGGQGHGRGSYNSRGNNNSNDRQDSGYNNSRWDSDAKDGDRGWGSFPG
SKVQNSPGREAFPGGWGSGGGGGSDNGSSGWGTGFKRGSSQSESGNDGWSGGGSGGW
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaacatagtctctgatgaagaagatgaggtcgagctcgaagactatgacagg
gaacctgtcgacgctgatgcagtggaccacgaggatgacgatgaggaagatgaggaaggg
caagatgaatatgagaaggatgattttatagtagatgatgttgaggaagaagaagaagta
gatgaagaagaagagagggcagacagtgatgaagaaaggcacaaaaagaggaagaaaaag
aaaaaaagagaatctgaggatgtccttgatgaagatgattatgagctccttcgagacaac
aatgctttccaccaccgaccaaaggatagcaaaaaatttaaacggttgaaaaaagctcag
agggattctgatgaggagcgctttggtttttctgatgaggagtttgacggaagtggtaaa
ggtgggcgaacagctgaagagaaacttaagcgcaccttatttggtgatgatgaaggagtt
ccccttgaggatattgccgaagaggagcaggaggcagaggaggaagaagatggagacatt
ggcgaggaggatgaaatggctgactttattgtggacgaagaagttgatgagaatggagct
ccaatgagacggaagaagctgaagagaaagaaatctaggcaggcaccaggagttacatca
tctgctatacaggaagctcaggaactatttggtgatgttgatgacttcctgctgcgacgc
aagcgagatttagaatctagcgaatggaaggaaaccagattggataaggaatttgaacct
actgtactttctgagaagtatatgactgagaaagatgaggagattcggatgaccgatatt
ccagaaagaatgcagatatctgaggaaggcactggttctcctccaactgatgaaatcagt
ataacagaagagggaagctggatatataatcaacttgcaaatggtacggtgcccttgttt
cgtaagagaagagatgaggcacatgaagaagagcaggatttgcctttaaacagggatgac
atcattcgatttttggaattgcaccatgttcagaagctagatgtccccttcattgctatg
tatagaaaggaggaatgttcaagcctattgaaagatcctgagaaccttgaagttgatgat
gagaatcatgataaatctgacagggcacctatgctgaagtggcacaaggtgctttgggca
attcaggacttggataggaagtggttacttcttcaaaaacgaaagactgctctcgaattg
tattataataagcgattcgaagaagaatctcgacgaatatatgatgagacaagactcaat
ttaaatcagcagctttttgtttccattcttaagtcgctcaaggatgcggaatcggaaaga
gaggttgatgatgttgatgcaaagtttaacttgcattttcctccaggtgaggcaggtgtt
gatgaaggacagtataagaggcccaaaaggagatcccaatatagtacctgcagcagggct
ggactatgggaagttgcaagcaagtttgggtgcagtgctgagcaacttggaatgggcttg
tccttagaaaagatgggggaaatattggagaatgctaaggaaacaccagaggagatggcg
tcaaactttacatgtgcaatgtttgaaactccccaagcggttcttaaaggggccaggcac
atggctgcggttgaaataagctgtgagccaagtatcagaaaatatgtccgtagtatgtac
atggaaaatgctgtggtatccacaagcccaacgccagatggaaatgttgcaatagattct
tttcatcaatttgcgggtgtgaagtggttgcgtgaaaaaccaattaacaaatttgaggat
gctcaatggtttctcattcaaaaggctgaagaagagaagcttcttcaaataacttttaag
cttccagaaaaatacatgaataagttgattggtgactgcaatgagcattatcttagtgat
ggtgttagtaagtctgctcaactctggaatgagcagaggacattgatattgaaggatgct
ctgtacacttatttgttaccttcaatggagaaagaagcaagatccttgttaacaagtaga
gctaaaagctggttgctttgggagtatggaaaggctttgtggaataaagtttctgtgggt
ccatatcaacgcaaagaaaatgatgtttcttcagatgatgaagctgcaccaagggtcatg
gcctgctgctggggccctgggaagccagcaaccacttttgtgatgctagattcatcaggg
gaggtgctagatgtactttacgctgggtccctcaccttgcgttctcaaaatattaatgac
cagcaaaataagaaaaatgaccagcaacgtgttttgaagttcatgactgatcaccaacca
catgttgtggttttaggagctgtgaatttgtcttgtactaggctgaaggatgatatatat
gagatcatttttaagatggtggaggaaaatccgagagatgttggacatgagatggatgaa
ttaagcattgtgtatggtgatgagtctctgcctcgcctttatgaaaattctcggatttct
tctgaccaactagctgggcagccaggcattgttaggcgggctgctgctcttggccgttat
ctgcaaaatccgttggcaacagttgcaacactctgtggaccagcaagggagattttgtct
tggaagctcagctcgttggagaattttctcaaccctgatgagaaatatgcaatggttgaa
caggttatggtagatgttactaaccaggtagggctcgatattaatatggctacaagccat
gaatggttatttgcccctttacagttcattgctgggcttggccctagaaaggcagcatct
ttacagaggtctctggtgagggctggagcaattttcactagaaaagactttgtgacagta
catggactcggtaaaaaggtgtttgttaatgcagttggtttcttgcgtgtccggcgtagt
ggtttagctgcaagcagcagccaatttattgatttattggatgatacgaggatacatcca
gaatcttacggactggcacaggagatggctaaggatgtttatgaaatggacaatggtgac
acaaatgatgatgatgaggcactggaaatggcaatagagcatgttagagaccggcctaat
ttattgaaaaaccttgatcttgatgtgtatctccatgataagaagcgtgaaaataagaag
gagactttcaagtatatacaattagaattgatacagggttttcaggattggcgtaaacag
tataaagaaccaagtcaggatgaggaattttatatgatatcaggtgaaactgaggatacc
cttgctgaagggagaatagtacaggctaccgttcgcagggtgcaaggtggaagggcaata
tgtgtgctggaatctggattgactggtatgcttacaaaggaagactatgcagatgattgg
agggatatgcctgagttgtctgacaggctgcatgaaggtgacatactcacttgcaagatc
aaatcaatccaaaagaatagatatcaggtgtttttagtttgtagagagagagagatgagg
agtaatcgatatcagcaggtccgaaaccttgatccatattaccatgaagatcgaagtagt
cttcagagtgagcaagaaaaggctcgcaaagagaaggagcttgcaaagaaacactttaag
cctaggatgattgttcaccctcgcttccagaacataacagctgacgaagcaatggagttt
ttatctgacaaggatcctggagaaagtatcattcgtccaagttctcgtgggccatcgtat
ttaactctaactcttaaggtttatgatggagtttatgctcacaaagacatagttgaaggt
ggaaaggaacacaaggacattacaagtttacttcgaattggtaagaccctgaaaattggg
gaggacacttttgaggatttggatgaggtaatggaccggtatgttgatcccttggtggct
catctaaaggcaatgctaagttatcgcaagttcagaaggggcactaaagcagaagttgat
gagcaactcaggattgagaaatcggattatcctatgaggatagtttactcttttgggatt
tctcatgaacatccaggcacttttattctgacttacattaggagcacaaatccacatcac
gagtacgttggtctatatcccaagggattcaagtttcggaaaaggatgtttgaagacatt
gatcggcttgtggcatattttcagaggcacattgatgatcccatgcatgaatctgcaccg
tctattagatcagttgctgccatggtaccaatgcgaagccctgcaactgggggctcttca
ggggcatccacgggtagtggctggggtggttctgcaaatgatggtggctggagaggccag
tcttttgacagagatcgttcttctgtgccaggcgccagaacaggccgaaatgattataga
agtcgagacagtcatcagagtgggttaccaaggccatatggtgggcaaggacatggtcgt
ggctcttataacagcagaggaaataacaatagcaatgacaggcaggattctggttataat
aattccagatgggattcagatgccaaggatggtgatagaggttggggcagtttccctggt
tctaaggtccagaattcacctggaagggaggcttttcctggtggctggggaagtggtggt
ggcggcggctctgacaatgggagttctggttggggtactggcttcaaaagaggttcttca
caatcagagtctggtaatgatggatggtctggaggtggaagtggtggttggtga
DBGET
integrated database retrieval system
