Hevea brasiliensis (rubber tree): 110667897
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Entry
110667897 CDS
T05150
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110667897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hbr03041
]
110667897
03009 Ribosome biogenesis [BR:
hbr03009
]
110667897
Enzymes [BR:
hbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110667897
Spliceosome [BR:
hbr03041
]
Complex A
U1 snRNP components
U1 related factors
110667897
Complex B
110667897
Ribosome biogenesis [BR:
hbr03009
]
Eukaryotic type
Pre-60S particles
Helicases
110667897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110667897
NCBI-ProteinID:
XP_021684566
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MAATATASSAGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPTVSAHPSKS
SSVPISSSVQVQQSSRYGYGPVKEDDRYGRGNNAGSKFDAGAKSGQVARGGAVQSQNVPG
GTSNGPSGSSARGHGSSAGGSILSAEAYRRRHEITVTGDEVPPPLTSFEDTGFPSEILRE
VHNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFMHLRRCRNDAQLGPT
VLVLSPTRELATQIQDEAVKFGKSSRISCTCLYGGAPKGPQLKELDRGADIVVATPGRLN
DILEMRRISLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKI
AADLLVNPVQVNIGNVDELVANKSITQYIEVLAPMEKHRRLEQILRSQEPGSKIIIFCST
KKMCDQLARNLTRQFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDIR
VVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGDQDSKYASDLIKVLEGANQRVPSEI
RDMASRGGGMGRPRRWGSGPSGRDGGRGGRSDFGYGGREGGRGSWGLSSSSSSRPEKGGG
RGYDYESRDRYERGYSDSYDRGRSRSRSPDRGSSWVDRSKSWNRDRSQSRSPDRVPLTRE
RSPVRSFHQAMMERARATSPAQNQQERSRSPYGGGSNSHKVSTREHSPVRSFHQAIIERA
RATSPAQNQRERSRSPYGGGNNSHKVSTREWSPGRSFHQAMMERGRAMTEKGRSSSFGAQ
QDQGRSPGSRHEGRGYNNVPQSRFGEEEEEGMIPADEDGMIPPDDEGMYRGADGNSHRS
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaccgcaactgcttcctcagctggtccacgatatgcaccagaggaccctact
ctccccaaaccttggagaggtttagttgatggcaaaactgggtacctttatttttggaat
cctgagactaatgtcactcagtatgagaggcctactgtctcagctcatccatcaaagtct
tcttcagtgcccataagttcatcagttcaagttcagcaatcttctcgctatggatatggc
cctgttaaagaagatgataggtatggcagaggcaataatgctggatcaaaatttgatgct
ggagcaaagagtggccaggttgcaagaggtggagcagttcaatctcaaaatgttccaggt
ggaacaagtaatggaccttctggatcttctgctagaggacatggttcttcagctggaggg
agcattctttctgcagaggcttatcgtcgtcggcatgaaattactgttactggagatgaa
gtgcctccgcctcttacatcatttgaagataccggatttccttctgagattctgagagag
gtacacaatgcagggttctctgccccaactccaattcaggcacaatcatggccaattgct
ttacagagcagagatatagttgccattgctaagacaggttcgggtaagactttaggttac
ttgattcctgggtttatgcatctcaggcgctgccgtaatgatgcacaactgggtccaact
gtgctggtattgtcaccaacaagagagttggcaacacaaatacaggatgaagctgtgaag
tttggaaagtcatcaagaatttcttgcacgtgcttgtatggaggagcaccaaagggtccc
cagttgaaagaactagacagaggtgcagatattgtggttgccactcctggccgtttgaat
gacattcttgagatgaggagaattagcctcagccaagtttcttaccttgtactagatgaa
gccgatcgcatgttggacatgggttttgaaccccagataagaaagattgtaaaagaggtg
cctgctcgtcgccagactctcatgtacactgcaacttggccaaaggaagttcggaaaatt
gcagcagatctactggtcaatcctgttcaagttaatattggcaacgtggatgagcttgtg
gctaacaaatcaatcacacagtatattgaagtgttggcacccatggagaaacacagaagg
ttggaacagatattacggtctcaagaacctggatcaaagattattattttttgttcaaca
aaaaagatgtgtgatcaacttgcacgcaatcttacccgccagtttggagctgctgctatc
catggagacaaatctcagggtgagagggattatgttctgaatcagtttcgcacggggagg
tctccagtgctagtagccactgatgttgctgctcgaggactggacattaaagacatcagg
gtggtcatcaattatgatttccctactggagtggaggattatgttcatagaattgggagg
actgggagggctggtgctactggagttgcttacacattctttggtgaccaggattctaag
tatgcttcagatctcatcaaagtcttggaaggggcaaaccagcgggtcccttcagaaatt
cgtgatatggcttctcgtggtggtggaatgggcaggcctaggcgttggggttctggtcct
agtggacgtgatgggggccgtggtggacgaagtgactttggttacgggggaagggaaggg
ggaagaggtagttggggattgtctagttcctcttccagcaggccagaaaaaggaggtggc
cgtggatatgattatgaatcacgagacaggtatgaacgaggatacagtgatagctatgat
agaggccgtagtcgcagtcgaagccctgataggggatcaagttgggttgaccgcagtaag
agttggaatcgtgatcgcagtcagagtcgaagccctgacagggttccactcacacgtgaa
cggtctccagtccgcagttttcaccaggcaatgatggaaagagctcgagcaacctcacca
gctcaaaaccaacaagagaggtcaagatccccttatggtggtggcagcaattctcacaag
gtatctactcgtgaacattctccagtccgcagttttcaccaggcaattatagaaagagct
cgagcaacctcaccagcacaaaaccagcgggagaggtcaagatccccatatggtggcggc
aacaattctcacaaggtgtccactcgtgagtggtctccaggccgcagttttcaccaggct
atgatggaaagaggtcgggcaatgacggaaaaaggccggtcgtcgtcatttggtgctcag
caggatcaaggaagatctcctggaagtagacacgaggggagaggatataataatgtgcct
caatctcgttttggggaggaagaagaggaaggcatgattcctgctgatgaagatggcatg
ataccaccagatgatgaaggaatgtatcgaggggcagatggaaactcccatcgttcatag
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integrated database retrieval system
