Hevea brasiliensis (rubber tree): 110667899
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Entry
110667899 CDS
T05150
Name
(RefSeq) polygalacturonase At1g48100-like isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr00040
Pentose and glucuronate interconversions
hbr01100
Metabolic pathways
Module
hbr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110667899
Enzymes [BR:
hbr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110667899
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Ortholog
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
110667899
NCBI-ProteinID:
XP_021684574
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MIKMGGFNLENLSLITILIIILFAWSARIEPCHARQGKYWRQSKTAPATSVSMQSHHHGR
SLSKFTDSYYISPDKAMATQKGQSSASTFNVLDYGAKGDGHTDDTKAFEAVWAAACKVEA
STIVVPSGSIFLVQPISFSGPNCAENIIFQLDGKIIAPTSTGAWGSGLLQWIEFTKLKGI
TIRGKGVIDGQGSVWWNDLPTYSPDSEQVSSELSAKMPSTKPTALRFYGSTDVTVTGITI
QNSPQTHLKFDDCTSVQVSGFTAASPENSPHTDGIHLQNSRDVLIYSSDLACGDDCVSIQ
TGCSNVYIHNVNCGPGHGISIGGLGKDNTKACVSNVTIRDVAMQNTLTGVRIKTWQGGSG
SVQGVTFSNIQVSGVEIPIMIDQFYCDGSKCSNESSAVAVSDINYVNIRGTYTRNPLHFA
CSDNLPCTGVSLDTIELNSVGEDAQPFCWNTYGDLRGTLVPPIHCLQSGKSRKPVVYC
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaatgggtggcttcaatcttgagaacctttcactaatcaccatcctcatcatt
atcttatttgcttggtctgcaagaattgaaccttgccatgcaagacaaggcaagtactgg
aggcaaagcaaaactgccccagcaacctctgtgtctatgcagagtcatcaccatggccgc
agcttgtcaaagttcacggattcttattacatttcgccggataaagctatggcaactcag
aaaggacagagctctgcttccacctttaatgtccttgactatggtgctaaaggcgatggg
catactgatgacacaaaggcatttgaggcagtatgggcagctgcttgcaaagtagaagca
tcaacaatagtggttccttctgggtctattttccttgtccagccaatatctttttcaggt
cctaattgtgcagaaaacattatatttcagttagatggcaagatcatagctcccacaagt
actggagcttggggatcagggcttttgcaatggattgagttcacaaaactgaaagggatc
acaatcagaggtaaaggtgtcattgatggacaaggttcagtctggtggaatgacctacca
acatacagtccagattcagagcaggtaagcagtgagctcagtgcaaaaatgcctagcacc
aagccaacagctctaagattctatggtagtactgatgtgaccgtcaccgggataacaatt
caaaacagccctcaaacccatcttaaattcgatgattgcacatctgttcaggtttcaggt
ttcactgctgcatcacctgagaacagtccacatacagatggaattcacctacagaattcc
cgagatgtgctcatttacagctctgatcttgcttgtggggatgactgtgtatctattcaa
accggatgctcaaatgtttacatacacaatgtaaattgtggacctggacatggcattagc
attggagggcttggaaaagacaacaccaaagcctgtgtttcaaacgtcaccatccgggat
gttgcaatgcaaaacacattaaccggtgttaggataaagacatggcagggaggctcaggc
tcagtacaaggagtcacattctcaaacattcaagtttctggagttgaaattccaatcatg
attgaccaattctactgtgacggaagcaaatgctcaaacgaatcttcagctgtcgctgtg
tcagacataaactatgttaacataagaggcacatacacaagaaaccctctacactttgca
tgcagtgacaacttgccatgcaccggtgtctcactagatactatagagctgaattcagtt
ggagaagatgcccaacctttctgttggaacacatacggagatctgagaggaacacttgtt
cctccaattcattgcttgcaatcaggcaaatcaaggaaacctgtagtttattgctga
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