Hevea brasiliensis (rubber tree): 110667990
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Entry
110667990 CDS
T05150
Name
(RefSeq) putative tRNA pseudouridine synthase isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbr03016
]
110667990
Enzymes [BR:
hbr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
110667990
Transfer RNA biogenesis [BR:
hbr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110667990
Prokaryotic type
110667990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
110667990
NCBI-ProteinID:
XP_021684705
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MAISSLRLPLSPWLVKKPRQTSFESLLMPIFPSKLSLLCCFCGSSLRSPLSTSHALNQSE
KWQPFRKKKVVLRVGYVGTDYRAIFFMSGLQKQQDEHSLSTIEAELEHAIFKAGGILDSN
YGNLQKIAWARSSRTDKGVHSLATMITMKMEIPENAWKEDPYGIALAEHVNNYLPDTIRI
FSILPSQKSFDPRRECDLRKYSYLLPAEIIGIKSHFTTAEIDNHLSDFNDILNAFEGEHP
FHNYTIRSKYRKQFPTPKIGRVSKRPRSSGEISASEIEESDQEENYGIDRMIKLDHMEPT
KNSMESTQNSMESSFYNQNGSVLKDQKSNAVIRARWLHEPDETDRIGASHFRKIFRCSCG
KLEKSVGFDFVEISIWGESFMLHQIRKMVATAVAVKRKLLPRDILTLSLAKFSRIVLPLA
PSEVLILRSNSFLFRTRPGVGSRPEMLTMVESEEILKVVNDFYINVMLPQVSKFLDPCGF
PWKEWVEKLDEHTSIPDAELDEVRSAWKVWKEKLQSRTNVASVINW
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcaatctcctctctgcgattgccgctctctccatggctcgtcaaaaaaccaagacaa
acctctttcgaatctctcctaatgccaatatttccatcgaaactgagcctgttatgctgt
ttttgtggttcttcgcttcgatctccactatccacttctcatgccttgaaccagtccgag
aaatggcaaccctttcgcaagaaaaaggtggttctgcgggttggctatgtgggtactgac
tacagagctatctttttcatgtcaggtctccaaaagcaacaagatgaacattcgttgtcg
actattgaagcagaattagaacacgctatatttaaggctggcggaattcttgatagtaat
tatggaaatttgcaaaaaattgcctgggctagaagcagccgcactgataaaggagttcac
tcattggcaacaatgataacaatgaagatggagatacctgaaaatgcttggaaggaagac
ccttatggcattgcccttgcggaacatgttaataattatcttcctgatactatcagaatt
ttcagcattttgccctcacagaagagctttgatcctagaagagagtgtgacctacggaaa
tattcctacctccttcctgctgaaattattgggatcaaaagtcactttaccaccgctgaa
attgataatcacttatcagacttcaatgatatattaaatgcctttgagggggaacatccc
tttcataattatacaatacggtccaagtacaggaaacaatttcccacccccaaaattggg
cgtgtttcaaagagaccaagatcatctggtgagatatcagcctctgaaattgaggaaagt
gatcaagaagaaaattatggcattgatcgaatgattaaattggatcacatggaaccaact
aaaaattctatggaatccactcaaaattctatggaatccagcttctataatcagaatggg
agtgttctgaaggaccaaaaatcaaatgcagttatccgtgccagatggctacatgaacct
gatgagactgatagaataggtgcttcccatttcagaaagatttttcgctgttcttgtgga
aagctggagaaatcagtgggatttgattttgttgaaatttctatatggggagagtctttc
atgttacatcagatccgcaagatggttgcgactgctgtggctgtaaagcgcaagttactc
ccaagagatattttaacattgtcactagcaaagttctcaaggattgtcctaccacttgct
ccgtctgaagttctgattttgagaagcaacagttttttatttagaacaagacccggcgta
ggatcacgacctgagatgcttacaatggttgaatcagaagaaattctcaaggtagtcaat
gatttctatattaatgtaatgctgcctcaagtgtcaaagttcctggacccttgtggcttc
ccttggaaggaatgggttgagaaattggatgagcacactagcattccagatgcagaattg
gatgaagtaaggagtgcttggaaagtgtggaaagaaaaacttcagagtagaaccaacgtt
gcatcagtcataaattggtga
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