Hevea brasiliensis (rubber tree): 110668429
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Entry
110668429 CDS
T05150
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03030
DNA replication
hbr03410
Base excision repair
hbr03420
Nucleotide excision repair
hbr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110668429
03410 Base excision repair
110668429
03420 Nucleotide excision repair
110668429
03430 Mismatch repair
110668429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbr03032
]
110668429
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110668429
DNA replication proteins [BR:
hbr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110668429
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110668429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
RCF1-5-like_lid
PTCB-BRCT
AAA_30
AAA_22
AAA_19
Rad17
BRCT_2
AAA_assoc_2
AAA_18
AAA_5
RuvB_N
nSTAND3
Alpha_Helical
Zeta_toxin
AAA_17
Gp44_lid
Sigma54_activ_2
AAA_14
AAA_24
DNAX_ATPase_lid
RsgA_GTPase
TsaE
SurA_N
AAA_28
Motif
Other DBs
NCBI-GeneID:
110668429
NCBI-ProteinID:
XP_021685332
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MQRDIRKWLMKAHDKGNSNAAKPAQPAPTNTEKKPPLAELKPETPIQGDQENSGRRKTSK
YFAKDKQKPKDEKELEELPTKRKTKKDDQSVKPPPSKKVHKVDDSEDDDDFVLLDKKKNS
VDVTPSKKLKTGSGRAVAQKPVGNDASDEDDVKDAESPLKSSGRGRGGRGGSSASAGRRG
GSATLAGGRGRGSGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLERE
EAEDLIKRHGGRVTGSVSKKTNYLLCDEDIEGRKSSKAKELGTPFLTEDGLFDMIRSSNA
KALARGEATDHVKKVALVPKKSPQKAEGKIMSNSLKTNVNRKDSTTGASPLKQKEQTIKH
SSLPWTEKYRPKAPTDIIGNQSLVNQLHSWLKNWNQQFLDAGNKGKSKKQNDSSAKKAVL
LSGTPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADAKISKGIGGSNANCIKELVSNEA
LAVNMDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIVCICNDRYSQKLKSL
VNYCLLLSFRKPTKQQMAKRLMQVANAEGLQVNELALEELAERVNGDMRMALNQLQYMSL
SMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLI
QENYINYRPSSIGKDESGMKRMSMIARAAESIADGDIINVQIRRYRQWQLSQTGSLASCI
IPAALLHGQRETLEQGERNFNRFGGWLGKNSTMGKNLRLLEDLHVHLLASREFISCRETL
RLEYLTILLKQLTDPLRLLPKDEAVEKVVEFMNFYSISQGDTDTVVELSKFQGHTNPMDG
IPSAVKAALTRAYKEGNKLRMVRAADLISLPGVKKAPKKRIAAILEPSEDGLVEENGDAL
AENEEEDSSDTEDLEGTADGKKLQSELNSLNSKGIQVEVELKGTENSNTKKTPRGRGKGG
SSSVEKPAGRGRGGSGSSEKAASKRKR
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgagatattaggaaatggttaatgaaggcccatgacaaaggaaatagcaatgct
gcaaagcctgcacaacctgccccaacaaatacagaaaagaaacctcctctggctgagtta
aagcctgagacacctattcaaggagaccaagaaaattctggcagaaggaaaactagcaag
tattttgccaaggacaaacaaaaaccaaaagatgagaaagaacttgaggaacttccaaca
aagagaaaaactaaaaaagatgaccaatcagtgaaaccgccaccttcaaagaaagttcac
aaagttgatgatagtgaagatgatgatgactttgttttgcttgataagaagaagaattct
gtagatgtcactcccagtaagaaattgaagactggttcaggtagagcagttgctcagaaa
cctgtaggtaatgatgcaagtgatgaagatgatgttaaggatgctgaatctcctctcaag
tcaagtggaagaggtcgtggtggtaggggaggatcatcagcatcagctgggagaaggggt
ggatcagcaacactggctggtgggaggggcagaggtagcggacggggtggatttatgaat
tttggtgaaagaaaagatcctccgcacaaaggagaaaaggaagttcctgaaggagctcct
gattgtttagctggtttgacttttgtaattagcggaacgcttgacagtttagaaagagaa
gaagctgaggatttgattaaacgacatgggggtcgtgttactggatctgttagcaagaaa
actaattatcttttatgcgatgaggatattgagggaagaaaatctagcaaagcaaaagag
cttggtactcccttccttactgaggatggattgtttgacatgatacggtcatcaaatgca
aaagcccttgcacgtggtgaggcaacggaccatgtgaagaaagttgctttggtgccaaaa
aaaagccctcagaaagcagagggtaagattatgagcaactctttaaaaacaaatgtgaat
cggaaagattcaaccactggtgcctctcctctgaagcagaaagaacaaactatcaagcat
tcttctcttccatggaccgaaaaatataggccaaaagctccaactgatatcattgggaat
caatcactggttaaccaacttcatagttggttgaaaaattggaatcagcagttccttgat
gctggaaataagggaaagagcaagaaacaaaatgattctagtgccaagaaagctgtgcta
ttaagtgggacaccaggtatagggaaaaccacatcggcaaagctggtcagtcaaatgctc
ggtttccaggcaattgaggtaaatgccagtgacagtcggggaaaagcagatgccaagatt
agtaagggaattggtggaagtaatgcaaattgtataaaggaacttgtcagcaatgaagct
ttggctgttaacatggataggtcgaagcatccaaaaacagttttaatcatggatgaggta
gatgggatgtctgctggggatagaggtggagttgctgatcttattgctagcataaagatg
tccaaaattcccattgtctgcatttgtaatgatcgttatagtcagaaactaaaaagtcta
gtgaactactgcttgcttctcagtttccggaaacctacaaagcaacagatggcaaagagg
ttaatgcaagtagcaaatgcagaaggccttcaagttaacgagcttgctctagaggaactt
gcagaacgagtgaatggagatatgcgcatggcactaaatcaattgcaatatatgagtctc
tccatgtcagtcattaagtatgatgatgtcagacaacgccttcttagcagtgcaaaggat
gaagatatttctccattcacagctgttgataagctttttggctttaatggaggtaagctg
agaatggatgagcggattgaccttagcatgagtgatcctgatttggttcctcttcttatt
caggaaaattatattaattataggccaagttcaattggtaaggatgagagtgggatgaaa
aggatgagcatgattgcccgtgctgctgagtctattgccgatggagatataataaatgta
cagattcgaagatatcgacagtggcaactctctcaaactggttcccttgcttcctgtatt
attcctgctgcattgttgcatggacaaagggagacacttgaacagggagaaaggaacttt
aacaggtttggtgggtggctgggaaagaattcgactatgggcaaaaatttgaggcttttg
gaggatttgcatgttcatcttcttgcttctcgtgagtttatttcatgcagggagactctt
cgacttgaatatcttactattcttttaaaacaattgactgatcctcttcggctgctgcct
aaggatgaagctgttgagaaggttgtggagttcatgaatttttactcaataagtcaggga
gacactgacactgttgtggagttgtcaaaattccaggggcatacaaatccaatggatggc
atcccatctgctgtcaaagcagccctgaccagagcatataaagagggaaacaaattaagg
atggtacgagctgcagatttgatctcacttcctggcgtgaaaaaggcccctaagaagcgt
attgcagcaatcctagaaccatctgaggatggtttagtggaggaaaatggtgatgcatta
gcagaaaatgaagaagaagactcttctgacactgaggacttagaaggaactgctgatggc
aagaagctccagtctgaacttaatagtttgaattcaaaaggaatccaagtagaggtggaa
ctaaagggcacagaaaattcaaatactaagaagacaccaaggggcaggggaaaaggtggg
tcctcatctgtggaaaagcctgcaggcaggggaagagggggttctggatcctcagagaag
gctgcatcaaagagaaagagatga
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