Hevea brasiliensis (rubber tree): 110668975
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Entry
110668975 CDS
T05150
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110668975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110668975
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110668975
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110668975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
110668975
NCBI-ProteinID:
XP_021686091
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
MSIVPKGDSIQIREVWNDNLEEEFALIREIVDRFNYVAMDTEFPGVVLRPVGNFKNINDY
NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDNFCIWQFNFREFNISEDIFASDSIEL
LRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP
DTQAGFFDLINVYFPIVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTS
CTFRKLRDNFFSGSTEKYAGVLYGLGVENGQNTN
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattgtacctaaaggcgactccattcaaatccgagaggtgtggaatgataatctt
gaggaggaattcgctttgattcgcgaaattgtcgatcgattcaattatgtagctatggat
actgaattcccaggcgtggttttacgtcctgtggggaattttaagaacatcaacgattat
aactatcaaactttgaaagataacgttgatatgttgaaattgatccaattgggtcttacg
ttctctgacgagaacgggaatttgcccacttgtgggaccgacaacttctgcatttggcag
tttaatttccgtgagttcaatatcagtgaggacatctttgctagtgattctattgagctg
ttgcgccaatgcggaattgattttaagaagaataatgagaagggtattgatgtaaaccgg
tttggtgagcttctgatgtcgtcaggaattgttttgaatgacggcgtgcattgggttaca
tttcatagcgggtatgattttgggtacttgcttaagcttttgacttgcaggagtttgcct
gatacacaagctggattcttcgacttgatcaatgtgtactttcccattgtgtatgatatc
aagcatttaatgaagttttgcaatagccttcatggtgggttgaacaagcttgcagagttg
ttggaggtggaaagagttggtgtctgccatcaagcaggctctgatagcttgctcacgtct
tgcacatttaggaaattgagagacaactttttcagcggctccacagagaagtacgcaggt
gttttgtacggtcttggtgtcgagaatggacaaaatactaattga
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