Hevea brasiliensis (rubber tree): 110669438
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Entry
110669438 CDS
T05150
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hbr03036
]
110669438
Enzymes [BR:
hbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110669438
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Meiosis-specific proteins
Others
110669438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_C
ResIII
HHH_5
Cdd1
DNA_pol_lambd_f
IMS_HHH_1
AAA_22
HHH
Motif
Other DBs
NCBI-GeneID:
110669438
NCBI-ProteinID:
XP_021686806
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MDSYSLKSVSDLPAPFRSIFNFRYFNSLQSECFPVCYHSNVNMVISAPTGSGKTVLFELC
ILRLLSRFISEGRFIHIKGTLKTIYIAPSKALVQEKLRDWNQKFGSLGINCLELTGDNEF
YSIRTVQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALLLIDEVHLLNDPRGAALEAI
VSRIKMLAHNPEMKSSTLSCVRFLAVSATIPNIEDIAEWLSVPAQGIKRFGEEMRPVKLT
TKVFGYTPAKNDFLFEKRLQNYIFDILMQYSRGKSALVFCSTRKGAQEAAQRLSQTAMTF
GYSNPFIKDKEQQERLREASLSCSDKQMQSYILYGVGYHNGGLCLKDRNLVEGLFLKGDI
QILCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTGM
VIIMTRRETVHLYENLLNGCEMVESQLLSCVTEHLTAEIVQLTVSDIARAIEWMKCSYLY
VRMKKNPEKYAVRKVISRDRIEKHVQEISVQKVNELSRHQMIWTGEDGFLLKPLEPGRLM
TKYYLKFDTMKHIMQTPDNCSLEDALNVICCAEEIAWIQLRRSEKKLLNDINIDKDGRLR
FHVNGDKGKRKKRIQTREEKIFVLANDCLTGDPSVHDLSLTQDMNSVCSNGCRIAKCMKE
FFIFKKNYKGAVNSTLLAKSLYQKLWDDSPYLLKQLPGIGMVTAKALHSMGIKSFDELAE
ADPRRIEIVTGRKFPFGNHIKDSLLSLPPKVSISIEETVCRRQGKSKLVVTFTRLSQSIQ
SGKRHYADMIIGTEEDNLIHFHEKISRVDEFTSPYSTTVLLSTPKESKLSVKADLIFEEY
IGLDFHEKLILLKDNNSGMNYKCGQKQPSLFPPPVEICLIEDDNETISYASAERLCNLKK
SKTEDSSMPTFKLIDEELEEGKHPVEIKKDNQKVITKQAIFDHIREKAKNFPILTPAKSS
SSPLSEALLFTRKHPYKKDIDLDTELIVIEEIEGSKIPQQIVTNPSSEIREMEQNGYNIN
NHLAPKQGTPSRSSGTMNFLDYKGGRPSESEKSILKSLTEETIFGHIRERANNFPVLSRT
MQSESPMWTKEQSTENQPEFCIAASDALSEMFYDDKIMRETVIISDLEPGGTVMNDCDSS
AGAKVKENKFPRSPCLTYESLSISPRISRINNDPSCMEILPFDISMIKDNTRSLDSASSM
EYKRKQLKHCSPNGSKRQCWSMAMAGKTKEVDSFHGFESVFSFL
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggattcatattcgctaaagtctgtgtcagatttgcccgcaccatttcgttcaattttt
aacttcaggtactttaattcactgcaaagtgaatgttttcctgtctgttaccattccaat
gtaaatatggtaatctcagcaccaactggaagtggtaaaacagtgctctttgagctttgt
atactgaggcttctctcaaggtttatatcagaggggaggtttatccacatcaagggaact
ctcaaaacaatctacatagcgccatctaaggctttggtacaagagaagcttcgtgattgg
aatcagaaatttggatcattggggataaattgcttggagctgacaggggacaatgaattt
tacagcataaggactgtacaagaagcagatattatcctaactactcctgagaaatttgat
gctgtgactcgatatcgcataaaggatggtggcttgagctttttcagtgacattgcactt
ctacttatcgatgaagttcacctactgaatgatccacgtggagcagctttggaggcaata
gttagtagaataaaaatgcttgctcacaaccctgaaatgaaatcaagtactctatcatgt
gtccgttttctggcagtttcagccacaattccaaacattgaggacattgctgaatggctt
agtgttccagcccaaggaattaaaaggtttggagaagaaatgagacctgtaaagttaaca
actaaagtttttggctacaccccagcaaagaatgattttctatttgaaaagcgccttcaa
aactatatatttgatattctgatgcagtattcaagagggaaatctgctcttgttttttgt
tcaactcgaaaaggagcacaagaagcagcgcagcgactatctcagacagcaatgaccttt
ggctattcaaatccattcattaaagacaaagaacagcaggaaaggctaagggaagcttca
ctatcgtgcagtgataaacaaatgcaatcatatatcctttatggtgttggttatcacaat
ggtgggctttgcttgaaggatcgcaaccttgttgagggtctctttctaaagggtgacatt
caaattctatgtacgacaaacacccttgcacatggaatcaacttaccagcacatacagtg
gtcataaaatcaacacagcacttcaacaaggaaaaaggtctttacatggaatatgaccga
tctacaatactgcagatgtgtgggagggcaggtcggcctccatttgatgatacaggaatg
gttataataatgacaagaagagaaacagtccatctgtacgagaatctcttaaatggatgt
gaaatggtggaatcacaattgctttcgtgtgtgacagagcacttgactgcagagatagtt
cagttgactgtttctgatattgcaagggcaattgaatggatgaagtgctcatatttatat
gtgaggatgaaaaagaatcctgagaaatatgcagtcagaaaagtgatttctagagaccgc
atagagaagcatgtgcaagagatttctgttcagaaagttaacgagttatcacgccatcaa
atgatctggactggagaagatgggttccttctgaagccactagagcctggaaggttgatg
accaagtactatttgaaatttgatacgatgaaacacattatgcagaccccagataactgc
agtttggaagatgcacttaatgttatatgctgtgcagaggaaattgcttggatacaactc
agacgcagtgagaagaagcttctaaatgacatcaacattgataaagatgggcggcttcgc
tttcatgtaaatggtgataaggggaaacggaaaaagcgtattcaaactagagaagagaaa
atatttgttttggcaaatgattgcttgactggggatccttcagttcatgatttatcccta
acccaggacatgaattctgtatgctcaaatgggtgtagaattgccaaatgcatgaaagag
ttttttattttcaaaaagaattataaaggagctgtgaactcaaccctgttagccaaatca
ttatatcagaaactctgggatgacagtccatacttgctgaagcaattgcctggcattgga
atggtgactgctaaggctctgcattcaatgggaattaagtcatttgatgaactagctgaa
gctgatccaaggagaattgagatagttactggccgaaagttcccatttgggaaccatatc
aaggattctctgctgtcattacctccaaaagtcagcatcagcattgaggaaactgtttgc
cggaggcaagggaaatccaagctagtagtgacgttcactaggttatcacaatccatccaa
tcggggaaaaggcattatgctgatatgattattggtacagaagaagataatctgattcac
tttcatgagaaaataagcagagttgatgaatttaccagcccctacagcacaacagttctc
ctatcaactcctaaagaaagcaagctgagtgtcaaggctgatcttatttttgaagaatac
attggtcttgatttccacgaaaaactcatactgttgaaggacaacaattcaggaatgaat
tacaaatgtgggcagaagcagccttccctttttcctccacctgtggaaatttgcttgata
gaagatgacaatgaaaccatatcttatgcttcagctgaaaggctttgcaatttgaaaaaa
tcaaaaacagaagacagctcaatgcccactttcaaactcatagatgaagaattggaagaa
ggtaagcatcccgttgaaataaaaaaggacaatcagaaagtcataactaaacaagcaata
ttcgaccacatacgtgaaaaggccaagaacttccccatcttgactcctgcaaaatcttcc
tcttctccattgtcagaggcgttgcttttcacaagaaagcatccctataagaaggacatt
gatcttgataccgaactgattgttatagaagagatagagggaagcaaaattccacaacag
attgtcacaaatccgagttctgaaatcagagaaatggaacagaatgggtataatatcaac
aaccatctcgctccaaagcagggcactccgtctagaagttcgggtactatgaacttcttg
gattacaaaggtggtcgtccttctgaatctgagaaaagcattctgaagagtctaactgaa
gaaacaatatttggtcacatacgggaaagagccaataattttccagtgttatcaaggact
atgcaatctgagtctccaatgtggaccaaggaacagtctactgagaatcagcctgagttt
tgcattgctgcgtctgatgcattaagtgaaatgttttatgatgataagatcatgagggaa
actgtaatcatttcagatttggaacctggagggacagtgatgaatgattgtgattccagt
gcaggggcaaaggtgaaagaaaacaaatttcctcgaagtccatgcctaacatatgagagt
ttgagtatctctcccagaatttcaagaatcaacaatgatccatcttgtatggaaatttta
cctttcgacatttccatgataaaggataacactagatcactagactcagcaagctccatg
gagtataaaaggaagcagctgaagcattgttctcctaatggatcaaaaaggcagtgctgg
tcaatggcaatggcaggcaaaacaaaggaagtagattcatttcatggatttgaaagtgtt
ttttcatttctctga
DBGET
integrated database retrieval system
