Hevea brasiliensis (rubber tree): 110669839
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Entry
110669839 CDS
T05150
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110669839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hbr03041
]
110669839
Spliceosome [BR:
hbr03041
]
Complex A
U1 snRNP components
U1 related factors
110669839
Complex B
110669839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
DUF1707
Motif
Other DBs
NCBI-GeneID:
110669839
NCBI-ProteinID:
XP_021687358
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MDNSSQSSGTQFRPVGPAQQGQPFIPVASQQFRPVGQGMPAGQSPSLQFSQPMQQLPQWP
NQPGHATPSSQAVPLPYVHPNRPMTAGPPQLQQTAPSVSNHAPGLGASAIPLSSPYTFTP
PFGQPQNNVSASSQFQPMPQIHAPVVPAGGQPWLAPGSNGVSHGAAIQPTGQQPSVSSSS
DPAVNVPSHNQQSSSDWQEHTASDGRRYYYNKRTKQSSWEKPFELMTAIERADASTVWKE
FTTPEGKKYYYNKVTKQSKWSIPEELKLAREQAQQAVSQGTPSQADASHAPAAVAVTLAE
TSTTAISVSSSSFGVASSSVPVTPVVAVSNAPVAVSGSSALSVAQSNIPNAAGAQPPVVS
LTPLPTAVSGSSSVTAALVNAKTSLSGLDNVASQVAASSVDGASVLHTEEVRKGMAVAGK
SDANPLEEKTPDDEPLVFASKQEAKNAFKALLESANVQSDWTWEQTMREIINDKRYGALK
TPGERKQAFNEYLGQRKKIEAEERRMRQKRARVEFTKMLEESKELTSSMKWSKAVSLFEN
DERFKAVEKTRDREDLFDNYIVELGRKEREKAAEDHRRNVAEYKKFLESCDFIKVNSPWR
KVQDRLEDDERCLRLEKLDRLLIFQDYIRDLEKEEEEQKKIQKEQLRRAERKNRDQFRKL
LEDHVADGSLTAKTHWHDYCPKVKDLPQYHAVATNSSGSTPRDLFDGVAEELEKQYHDDK
TRIKDAMKTGKINLSSTWTFEDFKAALSDDVSSPPISEINLKLLYDELLERAKEKEEKEA
KKRQRLADDFTKLLYTYKEITASSSWDDSKQLFEESQEYRSIGEESLSREIFEEYVAHLQ
EKAKEKERKREEEKAKKEKEREEKEKRKERKEKEKEREREKGKERTKKDETDSENVDPTE
NYTHKEDKKREKDKDRRHRRRHQSGTDDVSSDKDEKEESKKSRRHGSDRKKSRKHSYTPE
SDSESRHKRHKRDHRDGSHRNGGYEELEDGEVGGDGEAH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggacaatagttctcagtcctctggtacacagtttcgaccagtaggtcctgcacaacag
ggacagccattcattccagtggcttcccaacagtttcggcctgttggacaagggatgcca
gctggtcagagtccatcgctgcagttttctcaaccaatgcagcagttgccacaatggcca
aatcagcctggccatgctacaccttcatcacaagctgtacctttgccatatgttcatcca
aataggccaatgacagcaggtccaccacagttgcagcaaactgctccctcagtaagtaat
catgcgcctgggttgggtgcctctgcaattcctctctcgtcaccatatacttttacccca
ccttttggccagccacaaaataatgtcagtgcatcgtcccagttccagccgatgcctcaa
atacatgcacctgttgttcctgcaggtggacaaccttggttggcccctggaagcaatggt
gtatcacatggtgcagcaatacagccaaccgggcagcagccttctgtatcttcttcctca
gatccagcagtgaatgttcctagccataatcaacagtcttcatctgactggcaagagcac
acagcttctgatggaaggagatattactacaacaaaagaacaaaacaatctagttgggag
aagccttttgaattgatgacagcaattgagagggctgatgcatcaacagtctggaaggag
ttcaccactccagagggaaaaaaatattattataacaaggttacaaagcaatctaagtgg
tcaataccagaggaattgaagttagctcgtgaacaggctcaacaagcagttagccaagga
accccgtctcaagctgatgcatctcatgccccagctgctgtcgctgttaccttggctgaa
acatctacgacagctatttcagttagctccagctcttttggagtagcttcaagctcagtt
ccagttacacctgttgttgctgtttctaatgctccagtggcagtttctggttcatcagcg
ctgtctgttgcacaatctaacataccaaatgctgctggtgcccaaccccctgtggttagc
ttgactcctttacccactgctgtttcagggagttctagtgttactgctgctttggttaat
gccaagacatcactaagtggccttgataatgttgcatctcaagttgctgccagttctgta
gatggagcatctgtgctgcatactgaggaagtgagaaaaggaatggcagttgcaggaaaa
agtgatgccaatccattagaggagaaaactccggatgatgaacctttagtgtttgctagt
aaacaggaggctaaaaatgcattcaaagctctcctggaatctgctaatgttcagtctgat
tggacttgggagcagacaatgagagagatcattaatgacaagagatatggtgctcttaaa
acacctggtgaacggaagcaagcatttaatgagtacttgggtcaaaggaaaaaaatagaa
gctgaggagaggcgcatgaggcagaaaagagctagggtggaattcaccaagatgttggaa
gagtccaaagaactcacatcatccatgaaatggagcaaagctgtaagtttgtttgaaaat
gatgagcggttcaaggctgttgagaaaaccagagatcgggaggatctttttgacaactac
attgtggaacttggaaggaaggaaagggaaaaggctgcagaggaccacaggcggaatgta
gcagaatataaaaaatttctggaatcctgtgacttcattaaggtaaatagcccatggcgg
aaagttcaagatcgcttggaggatgatgaaaggtgtttgcgtcttgaaaaacttgaccgc
ttactcattttccaggactatatccgtgacctggagaaggaagaagaggaacagaagaag
atacagaaggaacaactgagacgggcagagcgtaaaaaccgtgatcagtttcgcaaattg
ttggaagaccatgttgctgatgggtctcttactgcaaaaactcactggcatgattattgt
cctaaggttaaggacttgcctcaatatcatgctgttgcaacaaattcctcaggttcaaca
ccgagagatttgtttgatggtgttgctgaagagttagagaaacagtaccatgatgataaa
actcgtataaaggatgcaatgaaaacggggaagattaacttgtcatcaacatggacattt
gaagactttaaagctgctctttctgatgatgttagttccccaccaatatcagaaataaac
ctgaagcttttatatgatgagctacttgaaagagccaaggagaaggaggagaaagaagct
aaaaagcggcaacggcttgctgatgacttcactaaattattgtatacttacaaggagata
actgcatcttctagttgggatgattccaaacaactttttgaagaaagccaggagtataga
tcaattggggaagagagtttaagcagagagatttttgaagaatatgttgcacacttgcag
gaaaaggctaaagagaaggaacgcaaacgcgaggaagaaaaggccaaaaaggagaaagag
agggaggaaaaagagaagcggaaagagagaaaagagaaggagaaggaacgtgaaagggaa
aaagggaaggaacgaacgaaaaaggatgaaacagatagtgaaaatgttgatccaactgaa
aattatacccacaaagaggacaagaaaagggaaaaagacaaggataggagacatcggaga
cggcatcaaagtggtactgatgatgtgagttctgacaaggatgagaaagaggaatctaaa
aaatcacgcagacatggcagtgaccgtaaaaaatcaagaaagcattcatacacacctgag
tcagatagcgaaagccggcataaaaggcacaagagagatcaccgcgatggttcccataga
aatggcggctatgaggagctagaagatggggaggttggtggggatggggaggctcattag
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