Hevea brasiliensis (rubber tree): 110669866
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Entry
110669866 CDS
T05150
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110669866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hbr03041
]
110669866
Spliceosome [BR:
hbr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110669866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
110669866
NCBI-ProteinID:
XP_021687397
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MDRYSDKDKSSKRSREDRDRDSAKDHKHRSRDKDRDDKYRESDSLHRHHRSDRESHRDHH
KSSRREDRESSRDRESKRERSYDAREDREESRDRRERSHEPRSDHKSSLSRREDRERSRE
RSYNLREDREGSRDGREREANREMSYDSGDLEYEARRKRKERGDDEDRVVEREKRVRVSE
EKRERRRFEDKVKEEDVTDKNDNNIRIENAKRVESSKIMVKEEVNDEPTGGSTANGGLAT
DNGAALDSFTKTSSFVPENSMGPVHPLPTKVSSLSNTNENKGVSITRSHEVPGKSSTDGT
SSAAGKSGSLSLDALAKAKKALQMQKELSEKLKKIPLLSKGASSSSDNRAPPLVKEELKV
QSSGTGAVQGVNPPMPTITSAGTMSSSLATGKPPASGMESLPGLASIPNIEAVKRAQELA
AKMGFRQDPEFAPLINLFPGQVPAEVSVPQKPTKVPVLRIDALGREIDEHGNVVNVTKPS
NLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDQRMGINKNKLLRPKRMSFQFVEEGK
WSKEAEMMKLKSQFGEERAKDMKARQALHAKAKAAPDINPNLIEVSERVIIKEKVKEPIP
EIEWWDVPLLPSGAYSDIEDGDIIDKLKMEKITIYVEHPRPIEPPAEPAPPPPQPLKLTK
KEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRS
AAAEREQAHIDRNIARKLTPAERREKKEKKLFDDPNTVETMVSVYKINDLSHKKTRFKVD
VNAQENRLTGCAVIFEGINVVVVEGGSKSIKRYGKLMLRRINWAEAVEDEEEDGDGNEEK
PVNKCILVWQGSVAKPSFNKFSVHECVTEAAARKVLADAGVGHYWDLAINFSDDQM
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggataggtactctgataaggataaatcttccaaacgctcccgagaagaccgcgaccgc
gattccgccaaggatcacaaacaccgatctcgagacaaggaccgagatgataagtatcga
gaatctgattctctccaccgccaccatcgatcggaccgggaaagccatcgcgaccatcac
aagtcatcgaggcgtgaggatcgggagagctctcgagaccgcgaatctaagcgtgagcga
tcgtacgacgcgagagaggatagagaggagagtagggatcgtcgcgagcgctctcacgaa
ccgcgaagtgatcacaaatcttccttgtcgaggcgcgaggatcgagagcggtctcgcgag
aggtcctacaatctgagagaagatcgagaggggagcagagatggacgcgagagagaagcg
aatcgagagatgtcgtatgatagtggggatttggagtatgaagctagaaggaagagaaaa
gaaagaggagatgacgaggatagggttgttgagagggaaaagagggttagggtttcagaa
gagaagagggagaggaggagatttgaggataaagtgaaagaagaggatgttactgataag
aatgataataatattagaattgaaaatgcaaagagagtggaatcaagtaagattatggtg
aaagaagaagtgaatgatgagccaactggtggtagtactgccaatggcggccttgcaact
gacaatggtgctgccctggactcattcactaagacatcaagctttgtgcctgagaattca
atggggcctgttcatcctcttcctaccaaggtatcttcactttcaaacacaaatgaaaat
aagggagttagtattaccagatctcatgaggttcctggaaaatctagcacagatgggaca
tcttcagctgctggaaaaagtggaagtctatcccttgatgctttagcaaaagctaaaaaa
gctttacagatgcagaaggaactttcagagaagctgaaaaagataccacttttgagcaag
ggtgctagctcaagttcagataatagggcaccacccttagtaaaggaggaactgaaagta
cagtcttctggtactggtgcagtacaaggggtaaatccacccatgcccactattacttca
gcagggacaatgtcaagttcattggctactgggaagccacctgcaagtggtatggaatct
cttcctgggcttgctagtatacccaatattgaagctgttaaacgtgctcaggagcttgct
gctaaaatggggttccgacaggatcctgagtttgctcctcttataaacttgttccctggc
caggtgccagcagaagtttctgtaccacagaagcctaccaaggtccctgttcttcgtata
gatgcacttggtcgggaaatagatgaacatggaaatgtagttaatgtgactaagccaagc
aaccttagcaccctaaaggtaaacattaacaagcagaaaaaggatgcatttcagattctt
aaacctgaattggaagtggatcctgaatcaaatcctcactttgatcaaagaatgggcata
aataagaataagcttttgaggcccaaacggatgagtttccagtttgtagaggaagggaaa
tggtcgaaggaagctgaaatgatgaaattgaagagtcaatttggagaagaaagggcaaaa
gatatgaaggcaagacaagcgctgcatgcaaaggcaaaagcggctcctgatataaatccc
aatttgatagaggtatcagagagagttataattaaagaaaaggtcaaggagccaattcct
gaaattgagtggtgggatgtacctcttctgcctagtggtgcctatagtgacattgaggat
ggtgatataattgacaagttgaaaatggagaagatcacaatctatgtagaacacccacgt
cccattgagcccccagctgagccagctcctccaccgcctcaacctttgaagctaacaaag
aaagagcagaagaagcttcgaactcaacgtcgtttggctcgggaaaaagatagacaggag
atgattaggcaaggcttgattgaacccccaaaacctaaagtcaaaatgagcaatttaatg
aaagttcttggctctgaagctacacaggatcccacaaaacttgagaaggaaatccgtagt
gcagctgctgagcgtgaacaagctcatattgacaggaatattgcacgcaagcttactcct
gctgagcgccgtgagaagaaggagaagaagctctttgatgacccaaatactgtagaaacc
atggtttctgtctacaaaatcaatgacctgtcacacaagaagacccgcttcaaagtagat
gttaatgctcaagagaaccgattgactggttgtgctgtgatttttgaaggaattaatgtt
gtggttgttgaaggaggaagcaaatccattaagaggtatgggaagctaatgcttaggcgc
ataaactgggctgaggctgtggaagacgaagaagaagatggagatggcaatgaggagaaa
cctgtgaacaaatgcattttggtgtggcaaggcagtgttgccaaaccaagcttcaataag
ttttctgtacatgagtgtgtaactgaagctgcagctcggaaagtgttagctgatgctggt
gttggccactattgggatcttgccatcaacttctcagatgatcaaatgtga
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