Hevea brasiliensis (rubber tree): 110669931
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Entry
110669931 CDS
T05150
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03015
mRNA surveillance pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110669931
09123 Folding, sorting and degradation
03018 RNA degradation
110669931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110669931
03041 Spliceosome [BR:
hbr03041
]
110669931
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110669931
mRNA cycle factors
Stress granule specific factors
110669931
Spliceosome [BR:
hbr03041
]
Complex C
Other components
Complex C specific factors
110669931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_3
RRM_Nup35
RRM_7
RRM_RdRP1_2
RRM_MARF1
SET_assoc
Motif
Other DBs
NCBI-GeneID:
110669931
NCBI-ProteinID:
XP_021687480
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MAQIQVQHQAAPVPGPNGVAAVPGGIPFMPTSLYVGDLELNVTDSQLYDLFSQVGQVVSV
RVCRDLATGRSLGYGYVNYSNPQDAARALEVLNFTPLNNKPIRIMYSHRDPSLRKSGTGN
IFIKNLDKSIDHKALHDTFSSFGNILSCKVATDASGQSRGYGFVQFDNEESAQNAIDKLN
GMLLNDKQVFVGHFLRKQDRDGALNKTKFNNVFVKNLSESTTDEDLKNIFGEYGAITSAV
VMRDADGKSKCFGFVNFENADDAAKAVESLNGNKFDDKEWYVGKAQKKSEREFELKSRFE
QSMKEAVDKFQGVNLYIKNVDDSINDEKLKELFSDFGTITSCKVMRDPSGISRGSGFVAF
STPEEASRALSEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVAMTPSVAPRMPI
YSPGAPGLGQQFLYGQAPPGIIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQGQ
RPGGRRGVGHMQQTQQPVPLMHQQMLPRGRVYRYPPGRNMPDVPMAVPAGGMLSAPYDMG
GMPIRDAAAGQPMPITALATALANATLEQQRTLLGESLYPLVDQLEHDSAAKVTGMLLEM
DQTEVLHLLESPEALKAKVAEAMEVLRSVAAQQQATNPVDQLASLSLNDGLIS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagattcaggtgcagcatcaggcggctccagtgccgggaccaaacggagtggcg
gcggtccccggcgggattccgttcatgccgacgtcgctttatgttggagatcttgaactt
aatgtgaccgactcgcagctttacgatctgtttagccaggtgggtcaggtggtttctgtt
cgggtctgtagggacttggccaccgggcgatcactgggatatggttatgttaactatagc
aaccctcaagatgctgcaagagcattggaagttctaaacttcactcctcttaataacaag
cccattaggatcatgtactctcatcgggacccaagtcttcgtaagagtgggacaggaaat
atttttatcaagaacctcgataagtctattgatcacaaagccttacatgatacgttttcg
tcatttggcaacattctttcttgcaaggtggctactgatgcttctggccagtccagaggc
tatggttttgtacaatttgacaatgaagaatctgctcaaaatgctatagataaattgaat
ggcatgctacttaatgataaacaagtttttgttggacacttccttcgtaagcaggataga
gatggtgcattgaataagacaaaatttaataatgtcttcgtgaaaaatttatctgaatca
acaacggatgaggatttgaagaatatttttggcgaatatggcgcaattactagtgctgta
gttatgagagatgcagatgggaaatcaaagtgttttggatttgtcaactttgaaaatgct
gatgatgctgctaaagctgttgagtctcttaatggaaataagtttgatgataaggagtgg
tatgttggaaaagcacagaaaaaatctgaaagagagtttgaactgaagagtcggtttgag
caaagcatgaaggaagctgtagacaaattccaaggggtgaatttgtatatcaagaatgtg
gatgatagcatcaatgatgagaagctgaaggaactgttttctgactttggaacaattact
tcatgcaaggttatgcgtgatcccagtggaattagcagaggttctggttttgttgccttt
tcaactcctgaggaagcatctcgagctctttctgagatgaatggcaaaatggtggttagc
aagccactgtatgttgcacttgcgcaacggaaggaagagagaagggcgagacttcaggct
cagttttcacagatgaggccagttgccatgacaccttcagttgctccccgtatgccaata
tattctccaggtgctccaggcttaggtcagcaatttttatatgggcaagcacctccaggc
ataattcctccccaggctggttttggatatcagcaacaacttgttcctggaatgaggcca
ggaggtgctcctatgccaaatttctttgtgccactagttcagcagggtcagcagggccag
cgccctggagggcgacgtggagtaggtcacatgcaacagacccagcaacctgtccctctg
atgcatcagcagatgcttcctaggggacgtgtctatcgatacccacccggtcgcaacatg
ccagatgttccaatggcagttcctgctggaggtatgctgtctgctccctatgatatgggt
ggcatgccaattagagatgctgctgcaggacagcctatgcccattactgctttggctaca
gcccttgcgaatgctacccttgaacagcaaaggacgctactgggtgaaagtctctaccct
ttagtggatcagttggagcatgattcagcagccaaggttacaggcatgcttttggagatg
gatcagactgaggttttacacctgcttgaatcaccggaggctttaaaggctaaagtagca
gaggctatggaggtgctaaggagtgttgctgctcagcagcaggcaacaaaccctgttgat
cagcttgcctcactatccctgaatgatggtctcatctcatga
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integrated database retrieval system
