Hevea brasiliensis (rubber tree): 110670070
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Entry
110670070 CDS
T05150
Name
(RefSeq) eukaryotic initiation factor 4A-3-like isoform X1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03013
Nucleocytoplasmic transport
hbr03015
mRNA surveillance pathway
hbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110670070
09122 Translation
03013 Nucleocytoplasmic transport
110670070
03015 mRNA surveillance pathway
110670070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110670070
03041 Spliceosome [BR:
hbr03041
]
110670070
03009 Ribosome biogenesis [BR:
hbr03009
]
110670070
03012 Translation factors [BR:
hbr03012
]
110670070
Enzymes [BR:
hbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110670070
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110670070
mRNA cycle factors
Stress granule specific factors
110670070
Spliceosome [BR:
hbr03041
]
Complex C
Other components
EJC/TREX
110670070
Ribosome biogenesis [BR:
hbr03009
]
Eukaryotic type
90S particles
Helicases
110670070
Translation factors [BR:
hbr03012
]
Eukaryotic type
Initiation factors
eIF-4
110670070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
110670070
NCBI-ProteinID:
XP_021687702
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MTQGLRLKGEKSIKAFKRKRKKKLHPYTRRKAMAAAATSVVPAGRSARRASAEDDKLVFE
TTDGIEPITSFDEMGIKNDLLRGIYAYGFEKPSAIQQRAVMPLIKGRDVIAQAQSGTGKT
SMIALTVCQLVDTSSREVQALILSPTRELAAQTEKVILAIGDYINIQAHACIGGKSVGED
IRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIRLLVLDESDEMLSRGFKDQIYDVYRYLP
PELQVVLISATLPNEILEMTSKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC
DLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSSMHGDMPQKERDAIMSEFRSGTTR
VLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKIL
RDIEQYYSTQIDEMPMNVADLI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacacagggcttacggttaaaaggcgagaaaagcataaaagcattcaaaagaaaaagg
aaaaaaaaattgcatccttacacacggcgcaaagcgatggcggccgcggcgacaagcgtg
gttccggcagggcggagtgctaggagagcctctgcggaggatgacaaattggtgttcgag
acgacagatggtatagaacctataaccagcttcgacgagatgggcataaagaacgatctg
cttcgcggaatttatgcctatgggtttgagaagccgtcggcaatccagcagagggcagtt
atgcccttaatcaaaggccgagatgtgatagctcaggctcaatccggtactggcaagacc
tccatgattgcgctcactgtttgccaactcgtcgatacctctagcagagaggtccaggca
ttgatattgtcacctacaagagaactggctgctcagacggagaaagtaatattggccatt
ggtgattacattaatatccaagcacatgcatgcattggaggcaaaagtgtgggtgaggat
atcagaaagctagagtatggagttcatgttgtgtctggaactccaggcagggtctgtgac
atgataaagaggaggacattacgcactagagccattaggttattagttcttgatgagtct
gatgagatgctgagcagagggttcaaggatcaaatttatgatgtatacagatatcttcct
ccagagcttcaggttgtcttgatttctgctacccttcctaatgaaattttggagatgaca
agcaagttcatgacagatcctgttaagattcttgtgaaacgtgatgaattgactttagaa
ggcatcaaacaattttttgtagcagttgaaagggaagagtggaaatttgataccctttgc
gacctttatgatactcttacaataacccaagctgttattttctgcaacacaaaacggaag
gtggattggctaactgagaagatgaggagcaataactttacagtctcatcaatgcatggt
gacatgcctcaaaaggagagagatgcaattatgtcagagttccgatctggtacaacgcgt
gtcctgatcactactgatgtttgggctcggggacttgatgttcaacaggtttctttggtg
atcaattatgacctaccaaacaatcgagaactttacatccatcggattggtcgttcaggt
cgttttggacgcaagggtgtcgccataaattttgtcaaaagtgatgatatcaagattttg
agagatatagagcagtactacagtacccagatcgatgaaatgccaatgaatgttgctgat
ctaatctag
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integrated database retrieval system
