Hevea brasiliensis (rubber tree): 110670579
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Entry
110670579 CDS
T05150
Name
(RefSeq) putative pectate lyase 2 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr00040
Pentose and glucuronate interconversions
hbr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110670579
Enzymes [BR:
hbr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110670579
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110670579
NCBI-ProteinID:
XP_021688364
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MASLPSLHFLSFLIVLHLALLTFQANALDYKPLSSYLPSYSKKVLNIIDSCWRNKPNWAS
NRRALADCAVGFGQGAMGGKYGAIYVVTSSYDDPVNPKPGTLRYGVIQTQPLWIIFGKDM
VITLKNELIVNSFKTIDGRGSKVEIAYGPCITIQGVSHVIVHGISIHDCKPGKSGMVRSS
PTHVGRRRGSDGDGIAIFAASNVWIDHCFIAHCTDGLIDVIHASTGITVSNNYFAQHDKV
MLLGHNDGYSADKVMKVTIAFNHFGTGLIERMPRVRFGYAHVANNRYDEWQMYAIGGSAN
PTIFSEGNYFIAPDNPFSKQVTKREANSGWKNWKWRSSKDVFMNGAYFVQSGYGSIAPPY
FRTQSFPVAPGSMVPALTSDAGPLSCLIGKSCG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacttccctctctacacttcctttcatttcttattgtactacacttagcttta
ttgacctttcaagcgaatgcactggattacaagcccttgtccagttatcttcctagctat
tctaagaaggtcctcaacatcatagattcatgctggcgcaacaaacccaactgggcctcg
aaccgccgcgccttggctgattgcgcggtgggttttggccaaggcgcgatgggagggaaa
tatggggctatatacgtagttaccagttcatacgatgaccctgtaaaccctaaaccaggt
acacttcgatatggggttatccaaacacagcctctatggatcatttttggcaaggacatg
gttattacccttaaaaatgagctaatagtgaatagttttaagactatagatgggagaggc
agtaaagtggagattgcatatggaccttgcataacaattcaaggtgttagccatgtgatt
gtacatgggataagtattcatgactgcaaaccagggaaatcaggcatggttaggagcagt
cctacacatgtagggcgaagaagaggttctgatggagatggaattgctatatttgctgct
tcaaatgtttggattgaccattgctttattgctcattgcactgatggcctaattgatgtg
atccatgcttcaacaggaatcaccgtctcaaataattactttgcccaacatgataaggtg
atgttgcttggacacaatgatgggtattctgcggataaagttatgaaagtaacaatagcc
ttcaaccattttggcacaggacttattgagaggatgccaagggtcagatttggctatgcc
catgttgccaacaatagatatgatgaatggcaaatgtatgcaattggcggcagtgctaat
ccaaccatctttagtgaagggaactactttatagctcctgataatcctttttccaagcag
gttactaagagagaggccaacagtggttggaagaattggaaatggagatcctctaaggat
gtattcatgaatggtgcttattttgtgcaatccggatatggaagtattgcaccaccttat
tttcgaactcaatcatttccagttgctcctggatcaatggttcctgctttaacatccgat
gctggtcctttaagctgtttgattggtaaatcatgcggatga
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