Hevea brasiliensis (rubber tree): 110670747
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Entry
110670747 CDS
T05150
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1-like
KO
K14962
COMPASS component SWD2
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110670747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110670747
03036 Chromosome and associated proteins [BR:
hbr03036
]
110670747
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110670747
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
110670747
COMPASS/SET1 complex (yeast)
110670747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
110670747
NCBI-ProteinID:
XP_021688601
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MERSPKGPSATGDYHKWRADRDQEHLTADPTKPEDSNPRQNALSEEDGDRLADSLQKPLT
VQEEKVSLELTEEILQSMEIGMVFRDYNGRISSMDFHKTSSYLVTASDDESIRLYDVASA
TCLKTINSKKYGVDLVCFTSHPTTIIYSSKNGWDESIRLLSLNDNKYLRYFKGHHDRVVS
LSLCSHKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFAIAFGGYIRM
FDSRKYEKGPFDIFSVGGDLSNANAVKFSNDGRLMLLTTMDGHIHVLDSFRGTLLSTYNV
KLVSMNSTLEASFSPEGMFVVSGSGDGRVHAWSVRSGKEVASWMTYETEPHVIKWALGSL
MFATGSSELSFWIPNFSKLAAYVGRK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagaggtcgcctaaaggcccgagtgccacaggcgattatcataaatggagggctgac
agggatcaagaacacttgactgcagatccaacaaaacccgaagacagcaaccctcgccaa
aacgccctttcagaagaagatggtgatcgtttagccgactccctacaaaagcctttgacg
gtacaagaagagaaagtatcgttggagctcactgaagagattctccaaagcatggaaatt
ggcatggttttcagggattataatggtagaatcagttccatggattttcacaagacgtca
agttatctagtgactgccagtgacgatgaatcaatccgcctttatgatgttgccagtgca
acatgtttaaagaccatcaatagcaaaaagtatggggttgatctggtctgctttacttct
catcctacaactattatatactcctcaaaaaatggatgggatgaatccatacgacttctc
tctttgaatgataacaagtacttgcggtattttaaaggtcatcatgacagggttgtctca
ctgagcttgtgctctcataaagaatgctttatctctggatccctagaccgaactgttctg
ctttgggatcaacgggctgaaaagtgtcagggtcttctacgtgtgcaaggaaggcctgct
acagcatatgatgatcaagggctagtttttgcaattgcctttggtggatacataagaatg
tttgactctcgcaagtatgaaaaggggccttttgacatcttttctgttgggggagatcta
tccaatgcaaatgctgtaaagtttagcaatgatgggagactaatgctcttgacaactatg
gatgggcatattcatgtccttgattcatttcgtggaacacttttgtccacatataatgtg
aagctagtttcaatgaattctacattagaggcatcttttagccctgagggaatgtttgta
gtatcaggttcaggtgatggtcgtgtccatgcttggagtgtaaggagtgggaaagaagtc
gcaagttggatgacttacgaaactgagcctcatgtgataaaatgggcccttgggagtctt
atgtttgcaactgggtcttctgaactatcattttggattccaaacttctctaaattggca
gcttatgttggaaggaagtag
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