Hevea brasiliensis (rubber tree): 110671011
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Entry
110671011 CDS
T05150
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03013
Nucleocytoplasmic transport
hbr03015
mRNA surveillance pathway
hbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110671011
09122 Translation
03013 Nucleocytoplasmic transport
110671011
03015 mRNA surveillance pathway
110671011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110671011
03041 Spliceosome [BR:
hbr03041
]
110671011
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110671011
Spliceosome [BR:
hbr03041
]
Complex C
Other components
EJC/TREX
110671011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
110671011
NCBI-ProteinID:
XP_021689049
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MSSKYPTVDNRPIEQWKVTELKEELKRRKLTTKGLKDDLIKRLGEALLIERENDAKDVDA
DIDLDKQSVDGTKNSEAVPVVSDAAKVDMNVVGEKTENVGDIKVQVDINDGAEATGQEPS
EGIIIGGVDSSTVEGEHIVPAAALEISTTVSESVASEVTLGGQDAQNSEAHELKRDSKLM
LDNEDTKPQLDLQDSKSQLDNDESKPQLEIEGLRPPHDDATLDSSAPNNQVSEVSRNLGF
QVKSDSISTDSVSINEKIELKDNIIADNVKLELDVVKPEMVEPSSNNVIPVGGESHPMDV
EEPQEKKASVEEKDDSNSTNPDMSKKNDIIDVGYSEKLNLDRSSGDDSMEEDVVESKQID
SNYNSDDVGDKSEKSGIHVVNEENTVDVVGSNLSLDQKKMNVENKTLPAVPAEKRKLNDQ
DAVESAEPLKRQRRWKSESLKMPEHQSSNVAPATTPKDASQPTLSRRNFSRSDSSVSVED
APRKRVVPPSQRPHTNSLRIDNFVRPFTLKAVQELLGKTGKVTSFWMDQIKTHCYVSYSS
VEEAIETRNAVYNLQWPSNGGRLLAAEFVEPKEVKLKVEAPPAAPVTPGATAAPPLPEPS
PRPQVSRQHLPPPPPLPSPPPLSNPPLAKERLAHPLPPLPEKHDPPIVTLDDLFRKTRAT
PRIYYIPLSEKQVAAKLAERGKNAKQ
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaaatacccaactgttgacaatcgaccaatagaacagtggaaggttacagag
ttaaaggaagaacttaagaggcggaaattgacaacaaaaggattgaaggatgatttaata
aaacgtttaggtgaagcacttctcattgagagggaaaatgatgcaaaagatgtggatgct
gatattgatttggataaacagtctgtagatgggacaaaaaattctgaggcagtgccagtt
gtttctgatgcagctaaagttgacatgaatgttgttggtgaaaaaactgagaatgtgggt
gatattaaggttcaggttgacatcaatgatggtgctgaagccacaggtcaagaacctagt
gaaggtatcataataggaggtgttgattcttctacagttgaaggggagcacattgttcct
gcagctgctctggagatcagcactacagtttctgagagtgtggcatctgaagtaacattg
ggtgggcaagatgcacaaaattctgaagcacatgaattgaaaagagattctaagctcatg
ctggacaatgaggatacgaagcctcagctggaccttcaggattcgaaatcccagctggac
aatgatgaatcaaagccccagctggagattgagggtttgaggcctccacacgacgatgcc
acactggactcttctgctccaaacaaccaggtatctgaggtcagccgtaatttagggttt
caagtaaaatctgattctatttctactgattctgtgtcaattaatgaaaagattgaacta
aaggataatataattgctgataatgtcaaattagaactagatgttgttaagccagagatg
gtggaaccatcatccaataatgtcatcccagttggtggcgaatcacatccaatggatgtt
gaggagccacaagagaagaaggcatctgttgaagagaaagatgacagcaattctacaaat
ccagatatgagcaagaaaaatgatattatagatgtgggttactcggaaaaattaaattta
gacagaagttctggtgatgattctatggaggaagacgttgtggagagtaagcaaattgat
tcaaattataactccgatgatgtgggagacaaaagtgagaaaagtggaatccatgttgtg
aatgaggaaaatactgttgatgtcgtggggagcaacttgtctttagaccaaaagaaaatg
aatgttgagaataaaactcttcctgctgtgcctgctgagaaaagaaagcttaatgatcaa
gatgctgttgaaagtgcggagcctttaaagaggcaacgcagatggaaatctgaaagcctc
aagatgcctgaacatcaaagctctaatgtagcacctgccactacgcctaaggatgcatct
cagcctactctttctagacgcaacttctcacgatctgactcctccgttagtgttgaggat
gcaccaagaaaacgtgttgttccaccatcacaaagacctcacactaattccctcagaatt
gataattttgtgcgaccttttaccctgaaagccgtccaagaacttctaggcaaaactggg
aaggtcaccagtttctggatggaccaaatcaaaacccattgctatgttagttactcatct
gttgaagaagctatagagacgagaaatgctgtgtataacctgcaatggccttcaaatggt
gggcgtcttttggcagctgagtttgttgaaccaaaggaagtaaaactaaaagtggaggct
cctccagctgcccccgtcactcctggtgctactgctgctccacctttgccggagccctct
ccccgtccgcaagtttctcggcaacatcttccacccccacctccccttccatctccacca
cctctgtctaacccgcctctggctaaggaacggcttgctcatccactgccaccacttcca
gagaaacatgaccctccaattgttactctggatgatctctttaggaaaaccagagcaact
cctcggatctattatattccgttgtcagaaaaacaagtggcagcaaaacttgctgaacgg
ggcaaaaatgccaagcaatag
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