Hevea brasiliensis (rubber tree): 110671012
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Entry
110671012 CDS
T05150
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03013
Nucleocytoplasmic transport
hbr03015
mRNA surveillance pathway
hbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110671012
09122 Translation
03013 Nucleocytoplasmic transport
110671012
03015 mRNA surveillance pathway
110671012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110671012
03041 Spliceosome [BR:
hbr03041
]
110671012
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110671012
Spliceosome [BR:
hbr03041
]
Complex C
Other components
EJC/TREX
110671012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
110671012
NCBI-ProteinID:
XP_021689051
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MSSKYPTVDNRPIEQWKVTELKEELKRRKLTTKGLKDDLIKRLGEALLIERENDAKDVDA
DIDLDKQPVDGTKFSEAVPVVSDAAKVDMNVVAEKTENVGDIKVQVDINDSAEATGQEPS
EGIIIGGVDSSMVDGEHTVPAATLEISTTVSESVASEETLGGQDAQNSETQELNGDSKLV
LDNEDTKPQLDLQDSKSQLDYDESKPQLEDEGLRAPHEVATLDSSAPNNQVSEVSPNLGF
QVKSDSISTDSVSINEKIELKDNINADNVKLELDVVKPEMVEPSSNNVIPVGGESYPMDV
EEPQEKKASVEEKDDSNSTNPDMSKKNDIIDVGYSEKLNLDRSSGDDSMEEDVVESKQID
SNYNSDDVGDKSEKSGMHVVNEENTVDVVGSNLSLDQKEMNVENKTLPAVPAEKRKLNDQ
DAVESAEPLKRQRRWKSEGLKVPEHQSSNVAPATTPKDASQPTLSRRNFSRSDSSVSVED
APRKLVAFYCLAVPPSQKPQTNSLRIDNFVRPFTLKAVQELLGKTGKVTSFWMDQIKTHC
YVSYSSVEEAIETRNAVYNLQWPSNGGRLLAAEFVDPKEVKIKVEAPPATPVTPGATAAP
SLLEASPRQQVSRQQLPPPPPLPSPPPLSNPSLAKERLAHPQPPPLPEKHDPPIVTLDDL
FRKTRATPRIYYLPMSEKQVAAKLAERGKNAK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaaatacccaactgttgacaatcgaccaatagaacaatggaaggttacagag
ttaaaggaagaacttaagaggcgaaaattgacaacaaaaggattgaaggatgatttaata
aaacgtttaggcgaagcacttctcattgagagggaaaatgatgcaaaagatgtggatgct
gatattgatcttgataaacagcctgtagatgggacaaaattttctgaggcagtgccagtt
gtttctgatgcagctaaagttgacatgaatgttgttgctgaaaaaactgagaatgtgggt
gatattaaggttcaggttgatatcaatgatagtgctgaagccacaggtcaagaacctagt
gaaggtatcataataggaggtgttgattcttctatggttgatggggagcacactgttcct
gcagctactctggagatcagcactacagtttctgagagtgtagcatctgaagaaacattg
ggtgggcaagatgcacaaaattctgaaacacaggaattgaatggagattctaagctcgtg
ctggacaatgaggatacgaagcctcagctggaccttcaggattcgaaatcccagctggac
tatgatgaatcaaagccccagctggaggatgagggtttgagggctccacacgaggttgcc
acacttgactcttctgctccaaacaaccaggtatctgaggtcagccctaatttagggttt
caagtaaaatctgattctatttctactgattctgtgtcaattaatgaaaagattgaacta
aaggataatataaatgctgataatgtcaaattagaactagatgttgttaagcctgagatg
gtggaaccatcatccaataatgtcatcccagttggtggcgaatcatatccaatggatgtt
gaggagccacaagagaagaaggcatctgttgaagagaaagatgacagcaattctacaaat
ccagatatgagcaagaaaaatgatattatagatgtggggtactcggaaaaattaaattta
gacagaagttctggtgatgattctatggaggaggatgttgtggagagtaagcaaattgat
tcaaattataactccgatgatgtaggagacaaaagtgagaaaagtggaatgcatgttgtg
aatgaggaaaatactgttgatgttgtggggagcaacttgtctttagaccaaaaggaaatg
aatgttgagaataaaactcttcctgctgtgcctgctgagaaaagaaagcttaacgatcaa
gatgctgttgaaagtgctgagcctttaaagaggcaacgcagatggaaatctgaaggcctt
aaggtgcctgaacatcaaagctctaatgtagcacctgccactacgcctaaggatgcatct
cagccaactctttctagacgcaacttctcacgatccgactcctccgttagtgttgaggat
gcaccaagaaaacttgttgctttttattgtttggcagttccaccatcacaaaagcctcaa
actaattccctcagaattgataattttgtgcgaccttttaccctgaaagctgtccaagaa
cttctaggcaaaactgggaaggtcactagtttctggatggaccaaatcaaaacccattgc
tatgttagttactcatctgttgaagaagctatagagactagaaatgctgtgtataaccta
caatggccttcaaatggtgggcgtcttttagcggctgagtttgttgacccaaaggaagta
aaaataaaagtggaggctcctccagctacgcctgtcactcctggtgctactgctgctcca
tctttgctggaggcttctccccgtcagcaggtttctaggcaacaacttccacccccacct
ccccttccatctccaccacctctgtctaacccttctctggctaaggaacggcttgctcat
ccgcagccacctccacttccagagaaacatgaccctccaattgttactctggatgatctc
tttcggaaaactagagcaactcctcggatctattatcttccgatgtctgaaaaacaagtg
gcagcaaaacttgctgaacggggcaaaaacgccaagtaa
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