Hevea brasiliensis (rubber tree): 110671401
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Entry
110671401 CDS
T05150
Name
(RefSeq) DNA repair protein RAD4-like isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
110671401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbr03400
]
110671401
DNA repair and recombination proteins [BR:
hbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
110671401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
110671401
NCBI-ProteinID:
XP_021689552
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MRTRANKQSKANEENLGKEITMAAGKESLADFSRESVDKVARRVNGRGSSGTKGNGKQVV
VDARITWNELDGGKFKDSLRNNDDETDDIDWEDGSYSILDSVSNHHLGDDGTTTVTVEFS
ESLDSAKRKPVRRATSEEKELAELVHKVHLLCLLARGRIIDSACDDPLIQASLLSLLPSH
LLKTSGVPKLSANALSPLVSWFHNNFHVRSCVSEKRSFQRALAFALETREGNPEEITALF
VALFRALKFTTRFVSILDVASIKPNADRFESSSQDNSRMHRGIFNNSTLMVDRTKEVFIS
PVKSFSCNEKINMCETSSKLPCKSKDSCPRSNKTHSKDPPDTVEVENRTTDSFLCEAQDK
VSESCVSPKCQGSKRKGDLEFEMQMQMAMFTTGIASTQSSMRSDVRSSTSDSSNISSPFK
RIKIITSEESPSHGISTAVGSQKTGSPLHWAEIYCSGENLTGKWVHVDAVNAIVDGEQKV
EAAAAACKTSLRYVVAFAGHGAKDVTRRYCMKWYKIAPQRINSVWWDAVLAPLRELESGA
TEASEGPEVAEKEKIDIESSERNSSVATRNSLEDVELETRALTEPLPTNQQAYKSHQLYA
IERWLAKCQILHPRGPILGFCSGHPVYPRACVQTLKTKERWLREGLQVKSSELPAKVLKQ
SGKLKKVKLSEDDDYDDADSRGTIELYGKWQLEPLQLPHAVNGIVPKNERGQVEVWSEKC
LPPGTVHLRLPRVFRVAKRLEVDYAPAMVGFEFKSGRSVPVFEGIVVCAEFKDAILEAYA
EEEERRETEEKKIHEAQAISRWYQLLSSIVTRQRLKNCYGNSSLQMSGNIKDTNYKSDVH
DSSQPHKHPRGCQKEDKQNPESGAPPVVQTEDHEHVFLAEDQSFDEESSVRTKRCHCGFS
VQVEEL
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccagagccaataaacaatctaaagcgaatgaagagaacttagggaaggaaatt
acaatggctgccgggaaagaaagtctggctgatttttccagggagtcagtagacaaagtt
gcaagacgtgtcaatgggcgtggatcatcagggacaaaaggaaatggcaaacaagtggtt
gtggatgcaaggattacatggaatgaattggatgggggaaagttcaaggattctctgagg
aacaacgatgacgaaacagatgatatagattgggaagatgggtcttattcgattctggat
tctgtaagcaatcatcatctgggtgatgatggcactacgacggtgactgttgaatttagt
gagtctcttgattctgctaagcggaagcctgttcgtcgagctacttctgaagaaaaggaa
ttggcagagcttgtgcataaggttcacttgctttgtttacttgctaggggcagaataatt
gacagtgcttgtgatgatcctcttattcaggcctctttactctctctcctaccatcacac
ttgttgaagacatcaggggtcccaaaacttagtgctaatgctttgtctccccttgttagt
tggtttcataataactttcatgttagaagctgtgtcagtgagaagagatcatttcagaga
gctttggcctttgcacttgaaactcgtgaaggaaatccagaagagattactgcattgttt
gtggcactattcagagctttgaagtttaccacccggtttgtgtccattctagatgttgcc
tccataaaacccaatgctgacagatttgaatcctcaagtcaagataatagcagaatgcac
agagggatattcaataattcaacattgatggtagatagaacaaaagaggttttcatttct
cctgttaaatcattctcatgcaatgagaaaataaatatgtgtgaaacttcttcaaagctt
ccttgtaaaagtaaagatagctgcccaaggagcaacaaaactcattctaaagatcctcct
gatacagttgaagtggaaaatcgaacaacagattcatttttatgtgaggctcaagataag
gtctctgaatcatgtgttagcccaaaatgccagggttcaaagaggaagggtgatcttgag
tttgaaatgcagatgcaaatggccatgttcacgacaggaattgcaagtactcaaagtagc
atgagatcagatgtgagaagctcaactagcgattcatcaaatatttcttctccatttaaa
agaattaaaataatcacaagtgaagaatctccctcccatggaatctcaactgcagttgga
tcacaaaaaacaggatctcctctgcattgggcagaaatatactgcagcggagagaatttg
acaggaaagtgggtgcatgtagatgctgtaaatgctattgtagatggagaacagaaggtt
gaagcagcagctgctgcatgtaaaacatctttgagatacgtggttgcttttgccgggcat
ggtgccaaagatgtaacccgcaggtactgtatgaagtggtacaagatagcaccacaacga
attaactctgtttggtgggatgcagtgttggccccattgagggagttagagtctggagca
actgaagcctcagaagggcctgaagtagctgagaaggagaaaattgatatagaatcttct
gagaggaattcttctgttgctactagaaactctcttgaggatgtggaattggaaactagg
gcactaactgagcctctgcccactaatcagcaggcctataaaagtcatcagctttatgct
attgaaagatggcttgcaaagtgtcagatacttcatcccagaggtcccattctgggtttt
tgttctggacatccagtttaccctcgtgcttgtgtgcaaacactcaaaacaaaagaaaga
tggttgcgtgaagggctgcaggttaaatccagcgagcttccagcaaaggtgttgaaacaa
tctggaaagcttaagaaagtaaaactttcagaagatgatgattatgatgatgctgattct
agaggcactattgaactttatgggaagtggcaactagaacccttgcagctgccacatgct
gtaaatgggattgtgccaaagaatgagcgtggtcaagttgaagtgtggtctgagaaatgc
ctgccacctgggacagtgcacttgcgacttccaagggtatttcgtgttgccaagagactg
gaagttgactatgcacctgccatggttggttttgaattcaaaagtggtcgatctgttcct
gtctttgagggaattgtggtgtgtgctgagttcaaggatgccatattagaggcttatgct
gaagaagaagaaagaagagaaactgaagaaaagaaaatacacgaagcacaagctatttct
aggtggtatcaacttctttcgtccatcgtaactcgacaaaggttaaaaaactgttatggg
aacagttcgttacaaatgtcaggcaacatcaaagatacaaattacaaatcagatgtacat
gacagtagtcaacctcataagcatcccaggggatgccagaaagaagacaagcagaatcct
gaatcaggagctcctccagtagttcaaacagaagatcatgagcatgtatttttggcagaa
gatcagagttttgatgaggagagttcagtgaggacgaagcggtgtcattgtggattttca
gtccaagtggaggagttatag
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