Hevea brasiliensis (rubber tree): 110672166
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Entry
110672166 CDS
T05150
Name
(RefSeq) polyadenylate-binding protein 3-like
KO
K13126
polyadenylate-binding protein
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03015
mRNA surveillance pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110672166
09123 Folding, sorting and degradation
03018 RNA degradation
110672166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110672166
03041 Spliceosome [BR:
hbr03041
]
110672166
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110672166
mRNA cycle factors
Stress granule specific factors
110672166
Spliceosome [BR:
hbr03041
]
Complex C
Other components
Complex C specific factors
110672166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RRM_3
RRM_RdRP1_2
RRM_MARF1
RRM_7
RBD_DGKtheta
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
110672166
NCBI-ProteinID:
XP_021690557
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MAVSATANATSVLTTAAAPVASVTGGGPFVNASLYVGDLEHNVNEGQLYDLFSQIAQVVS
VRVCRDQAKRSSLGYAYVNFSNPQDAANAMEALNSTPLNGKPIRIMFSHRDPSIRKSGYA
NVFIKNLDTSLDNKALHDIFAAFGTVLSCKVAVDNNGQSKGYGFVQFENEDAAQSAIKRL
NGMLINDKQVYVGLFVRHQERIRANGSPKFTNVYVKNLSDTTTDEDLKKIFGAYGTITSA
VVMKDQNGKSRCFGFVNFQNPDAAAAAAEKLNGATINNDKAWYVGRAQSKAERASELKTK
FEQERISRYEKPRGANLYLKNLDENIKDEKLKELFSEFGSITSCKVMLDHQGLSKGSGFV
AFSTPEEASRALIEMNGKMIGRKPLYVAVAQRKEERQAQLQAHFAQIRATGGMSPLPSGI
PGYHPGAPQQLYFGEGTPGMIPAQHAGYGFQHQLMPGVRPGFASNFIMPYHLQRQGQPGP
RMGTRRGGNPHQMRRQQLLHRNNNPGYMGNNPGYMGNARNGIDSFSVPQGLVGPMMPLPF
GVSGNPIDIQQPVIISTLASALASASPWTRNEMLGGHLYPLVERLQPDHVAKVTGMLLEM
DQTEVLHLIESPDALKKKVAEAMQVLREAAE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttctgctacagccaacgcaacttcagtgcttactacggccgctgcacctgtt
gcttctgtgactggtggtgggccgtttgtgaatgcgtctctctacgtgggagatctggag
cataatgtgaatgagggccaattgtatgacctgtttagccagattgctcaggtcgtgtct
gttagagtttgtagggatcaggcaaagcgatcctcacttggttatgcttatgtcaatttc
agtaatccacaagacgctgcaaatgcgatggaggctctgaattctactcctttgaatggg
aaacctatcaggattatgttttctcatcgagatcctagtattagaaaaagtggatatgcc
aatgttttcataaaaaatctggacacgtcacttgataacaaggcgttgcatgacattttt
gctgcctttgggactgtcctttcttgcaaggtagctgttgataataacggtcaatcaaaa
ggatatggttttgtacagtttgaaaatgaggatgctgcacagagtgcaatcaaacggttg
aatggtatgttgataaatgataaacaagtttatgttggactttttgttcgacatcaagaa
aggattcgggctaatggatcaccaaagtttactaatgtttatgttaaaaacttgtctgac
acaacaactgatgaggaccttaagaaaatttttggcgcttatggtaccatcaccagtgca
gttgttatgaaggaccaaaatgggaaatccaggtgttttggttttgtgaactttcagaac
ccagatgctgctgctgcagctgctgagaagctgaatggggctaccatcaataatgacaaa
gcttggtatgttggtagggcccaaagtaaagcagaaagggcatcagagttgaaaaccaag
tttgagcaggaaagaattagtagatatgaaaaaccaagaggtgcaaatttatatctgaaa
aatcttgatgagaacattaaagatgaaaagctgaaggaattattttctgagtttgggtct
ataacatcatgcaaggtcatgcttgatcaccaagggctgagtaagggctctggttttgtt
gccttttctacacctgaggaagcttcaagagctttgattgaaatgaatggaaagatgatt
ggaaggaaacccctttatgttgctgttgcccaacgcaaagaagaaaggcaggctcaacta
caggcacattttgctcaaattcgagctactggaggaatgtcacctttgccttctggaatt
cctggataccatccaggggcaccacagcagctttactttggtgaagggactcctggtatg
atacctgctcagcatgcaggatatggcttccagcatcaactcatgcctggagtgcgccct
ggttttgcttcaaactttatcatgccatatcaccttcaaagacagggacaacctgggccg
cggatgggaacacgtcgtggtgggaacccccaccagatgcggcggcagcagctattgcac
cgtaacaacaatccaggctacatgggaaacaatccaggctacatgggaaatgcaagaaat
ggcatagactcattttctgttccacaaggcctagtgggtcctatgatgccattgcccttt
ggggtctccggaaatcctattgatattcagcaaccggttatcatctcaactcttgcatct
gctttggcttctgcttccccatggacgcgtaatgagatgcttggtggccatctttatccg
cttgtggagcgtcttcagccagatcatgtggcgaaggtgactgggatgttattggagatg
gatcaaacagaggtgctacatctcatcgagtccccagatgctctgaaaaagaaggtggct
gaagcaatgcaagttctccgagaagctgctgaatga
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