Hevea brasiliensis (rubber tree): 110672470
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Entry
110672470 CDS
T05150
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110672470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hbr04131
]
110672470
Membrane trafficking [BR:
hbr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110672470
Hops complex
110672470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
zf-C3H2C3
TPR_Vps41
zf-C3HC4_2
TPR_11
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
110672470
NCBI-ProteinID:
XP_021690955
LinkDB
All DBs
Position
Unknown
AA seq
960 aa
AA seq
DB search
MYQWRKFEFFEEKYGGKSKVPDDVSGKIECCSSGRGKVVIGSDDGTVSLLDRGLNFNFAF
PAHSSSVLFLQQLKQRNFLVTVGEDEQISPQQSAFCLKVFDLDKMQPEGTSSSVPDCIGI
LRIFTKQFPQAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERIKRFQLQVDTVS
DKSHSSITGLGFRVDGQALQLFAVTPNSVSLFSLHNQPPRRQMLDQIGCTVNSVTMSDRS
ELIIGRPEAVYFYEIDGRGPCWAFEGEKKFLGCFRGYLLCVIADQRSGKDAFNVYDLKNR
LIAHSLVVKEVSHMLCEWGNIILIMSDKSALCIGEKDMESKLDMLFKKNLYTVAINLVQS
QQADAAATAEVLRKYGDHLYSKQDYDEAMAQYINTIGHLEPSYVIQKFLDAQRIYNLTNY
LENLHEKGLASKDHTTLLLNCYTKLKDVDKLNVFIKSEDGVGEHKFDVETAIRVCRAANY
HVHAMYVAKKAGRHELYLKILLEDLGRYDEALQYISSLEPSQAGVTVKEYGKILIEHKPV
ETIEILMRLCTEDGESAKRGSSSAAYLSMLPSPVDFLNIFMHHPQSLMDFLEKYTDKVKD
SPAQVEIHNTLLELYLSNDLNFPSISQASNGVDLSLGAKSGAPRKLKAESNGKLIVDHKD
TSKEKEHRERREKGLCLLKSAWPSDLEHPLYDVDLAIILCEMNGFREGLLYLYEKMKLYK
EVIACYMLAHDHEGLIACCKRLGDSGKGGDPSLWADLLKYFGELGEDCSKEVKEVLTYIE
RDDILPPIIVLQTLSRNPCLTLSVIKDYIARKLEQESKLIEEDRRAIEKYQDDTLAMRKE
IQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRSVME
MKRSLEHNSKDQDQFFQQVKSSKDGFSVIAEYFGKGIISKTSNGPTGTQRSGSLSSSSGF
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggaggaaattcgagttcttcgaggaaaaatacgggggaaagagcaaggtt
cctgatgatgttagtgggaagatcgagtgttgctccagcggcagaggtaaggtggtcatc
ggctccgacgacggcaccgtcagcttactcgatcgtggtctcaactttaatttcgccttt
ccagctcattcctcctccgtcctctttctccagcagctcaaacaacgcaacttccttgtg
actgttggagaggatgagcaaatatctcctcagcaatctgccttctgcctcaaggttttt
gaccttgataagatgcagccagagggcactagttcatctgtacctgattgcattggaata
ctgcgaatattcactaaacagttccctcaggcaaagataacatcatttttagtactagag
gaagctcctccaatattgctcatagctattggcttagacaatggttgcatttactgcatc
aaaggggacattgcgagggagcgtattaagcgcttccaacttcaagtggatactgtttca
gacaaaagccattcatccattacaggtcttggattcagagtggacggtcaagcccttcag
ttatttgctgtaactccaaattctgtgagtttattcagcttgcacaatcaaccacccagg
cggcaaatgctagatcagatagggtgcactgtcaatagtgtaacaatgagtgatcgctcg
gagttgataattggtcgacctgaagctgtttatttttatgaaattgatgggcgtggtcct
tgttgggcatttgagggagagaagaaattcctagggtgctttcgtggttaccttttatgt
gttattgcagatcaaagaagtggcaaagatgctttcaatgtttatgacctgaagaaccgc
ttaatagcccacagtctagtagttaaggaagtttctcatatgctctgtgaatggggtaac
ataatacttataatgtctgataaatcagctttgtgtattggggagaaagatatggaaagc
aaactggatatgctcttcaagaaaaatctctatactgtggccatcaatcttgttcaaagt
cagcaagctgatgctgcagccacagcagaagtgctaaggaaatatggagaccatctgtat
agcaaacaagattatgatgaggctatggcccagtacattaacaccattggtcaccttgaa
ccttcatatgtgatacagaagtttctggacgcacaaagaatatacaaccttacaaattac
ttagaaaatttacatgagaagggtcttgcttctaaagatcatactactcttctcttaaac
tgctataccaaattgaaagatgttgacaagctgaatgtatttattaaaagtgaggatgga
gttggggaacacaagtttgatgtggagactgcaataagggtctgccgcgctgccaattac
catgtgcatgcaatgtatgttgctaagaaggcagggaggcatgaactgtatctaaagatc
ttgcttgaagaccttggccgatatgatgaggccttgcagtatatttcaagccttgaacca
agtcaggctggggttactgtgaaagaatatggtaaaattcttatagagcacaagccagtt
gagacaattgagatactcatgaggctttgcactgaggatggggaatcagctaagagagga
tcttcgagtgctgcatacttatctatgttgccatcacctgttgattttctcaacattttc
atgcatcacccacagtctcttatggactttcttgaaaaatatactgacaaggtaaaggat
tctcctgctcaggtagaaattcacaatacacttttggaactgtacctgtcaaatgatttg
aactttccatcaatatcacaagctagcaatggtgtagatctttctctcggagcaaaatca
ggagcacctaggaaattgaaagcagaatccaatgggaaattgattgttgatcacaaagat
acatccaaggaaaaagagcacagagaaaggcgtgagaaaggactatgcttgctgaagagt
gcatggccatctgacctggagcatccactttatgatgttgatcttgctataatactctgt
gaaatgaatggatttagagaagggcttttatatctatatgaaaagatgaaactatataaa
gaggtgattgcttgctacatgctggcccatgatcatgagggtttaattgcatgctgcaaa
aggctgggagattcaggtaagggaggtgacccatctctttgggctgatttgctgaaatat
tttggtgaactaggagaagattgctccaaagaagtgaaggaagttttgacttatatagaa
agagatgacatcctgcctcctattattgttcttcagaccttgtccagaaatccatgcctt
acactctctgtcatcaaggattatatagctcggaagcttgaacaagagtcaaagcttatt
gaagaggatcgtcgagcaattgagaagtatcaggacgacacattggcaatgagaaaagaa
attcaggatcttaggaccaatgcaaggatctttcagctcagcaagtgcactgcttgcact
ttcaccctagatcttcctgctgtacacttcatgtgcatgcattcattccatcagcgttgc
cttggtgataacgaaaaggaatgccctgagtgcgcaccggagtacaggtctgttatggag
atgaagaggagtctggagcataattctaaagatcaagatcagttttttcagcaagtgaag
agttctaaggatggattttctgtgattgctgagtattttggaaaagggatcattagcaaa
accagcaatggccctacaggaacccagagatctggcagtttgtcttccagcagtggcttc
tga
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