Hevea brasiliensis (rubber tree): 110672712
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Entry
110672712 CDS
T05150
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110672712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hbr04131
]
110672712
Membrane trafficking [BR:
hbr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110672712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_Vps41
Clathrin
VPS8_N
TPR_VPS8_2
WD40
Beta-prop_EML
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
WD40_Prp19
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_RIG_2nd
zf-RING_Vps41
Beta-prop_HPS5
zf_RING_Vps8
MinC_N
Motif
Other DBs
NCBI-GeneID:
110672712
NCBI-ProteinID:
XP_021691263
LinkDB
All DBs
Position
Unknown
AA seq
1974 aa
AA seq
DB search
MTMKLTTSKLPMELDLDSFLNLHSDSDDDSTAVPHRTLDEILNDSDSSTSTSPPSSPSSL
KINQSRLSDLPLSLNDAVSDDSTGSLKRTQSQLLGDNSDQTRPNSFTRVKSGGLSADSVW
RASSSSRPLPSLFGGVRSNAKPGAALAAAAAASRSVPTPHAAAIKSRRAVSLRKVMDTGK
SSSLVGDDHEIVSNSSTGDSIVAATERNRSDGKLAAEDDNAGDYQSALEDEISARDRNLE
TTTEVFPSKDLAGEVEAADKMEELRITNYEQDATTSISNSTVYLHLDDGSKNLGSDDRKD
EMIATVSSDEDSKFVDVNDSCEVDILSSSRDDDHGKCELNSTMMPLEEGDYLEKDLQSSK
DDESGITTGGGDDASSISEISELVEERIEQLESERISKRAQKKLRSTMKPLELAEELEKK
QASTGLHWEEGAAAQPMKLEGVRRGSTTLGYFDIDASNAITRTIASQAFRRDHGSPQVLA
VHLNYIAVGMAKGVIVVASSRYSSYSTDNMDSKMLILGVQGDRSHAPVTSMCFNQQGDLL
LAGYGDGHITVWDVQRASAAKVITGEHMAPVVHALFLGQDSQVTRQFKAVTGDSKGLVLL
HAFSVVPLLNRFTIKTQCLLDGQRTGTVLSALPLLFDESVGGALPSSQGNASLSSSSIGN
MMGGVVGGDAGWKLFNEGSSMAEEGVVIFVTHQTALVVRLTPTLEVYAQLSKPEGVREGS
MPYTAWKCTTQSRSSSSENITADVAERVSLLAVAWDRKVQVAKLVKSELKVFGTWSLDSA
AIGVAWLDAHMLVVLTLTGQLYLFAKDGTVIHQTSFAVDGSGGDDHVAYHTHFINIYGNP
EKAYHNCVAVRGASIYILGPMHLVVSRLLPWKERIQVLRRAGDWMGALNMAMTLYDGQAH
GVIDLPRAVDAVQEIIMPYLVELLLSYVDEVFSYISVAFCNQIGKVEQDDQKSGSGSVHS
EIKEQFTRVGGVAVEFCVHIQRTDILFDEIFSKFVAVQHRDTFLELLEPYILRDMLGSLP
PEIMQALVEHYSSKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYGALVYLFNKGLDD
FRAPLEELLLVSRSSDRESAVALGYRTLVYLKYCFSGLAFPPGHGALPPTRLPSLRTELV
QFLLENSSALNSRVVLGLSSRGTYLNLYHLLELDTEATLDVLRLAFMDDENPKPEFTSHD
VANINMENEQENITTIESQNILVQNTLNALVQIIEKDASQAAEHASSDDTGSVEAWPSKR
DIGNLFEFIAYHVACRKAYVSSSVLSQILEYLTSESNLSASFPAHVIKTLKRREKQVLAL
LEVVPETDWNSSYVLQLCEKAHYHQVCGFIHTIRNQYLAALDSYMKDVDEPVHTFAYINN
TLRQLSGNEREDFQSAVMSRIPELVVLSREGTFLLVIDHFNSNNSHIFSQLHSHLKSLFL
YLKTVIEVHLFGTLNFSHLKKDDVLDAFSGRRVKDQLKGLEAYLERISEFPKFIRNNPVH
VADDMIELYMELLCQYERDSVLKFLETFDSYRVEHCLRLCQEYGITDAAAFLLERVGDVG
SALFLTLSGLNDKFAVLDTAVGSVISTTTLRGSAGIDYYSTVLKMKEVDEIRSILNSCIG
LCQRNTPRLQPEESETLWFRLLDSFCEPLMDSHADERVLKESHVGMPAETLGEHEDDEPI
IKWKISRSHKGAHILRKLFSQFIKEIVEGMIGYVRLPTIMSKLLSDNGSQEFGDFKITIL
GMLGTYGFERRILDTAKSLIEDDTFYTMSLLKKGASHGYAPRSLICCICNCLLTKGSSSF
QIQVFSCGHATHLQCELLESDSSSKGSLSGCPVCMPKKNTQRPRNKSILPENGSVNKVSS
RSKRSQGTSFLHLHEDSLDSSQQISRFDILTNLRKDQKLVQIENIPQLRLAPPAVYHEKV
KEGPELLTGESSSGAAKIEKPSKRRQLRELKVTGSSLRFPLKSSIFGKEKMNKR
NT seq
5925 nt
NT seq
+upstream
nt +downstream
nt
atgactatgaaactcaccaccagcaaactccccatggaactcgacctcgactctttcctc
aacttgcactccgactccgacgacgactccaccgccgtccctcaccgcaccctcgatgaa
attctcaacgactccgattcttccacgtctacctcccctccgtcttccccatcatcctta
aaaatcaaccaatctcgcctctctgatcttcccctttccctgaacgacgcagtctcagat
gactccacaggatccctaaagcgcacccagtctcagcttttgggtgataattctgaccag
acacgacccaattcttttactcgggttaagtctggtgggttatcggctgattcggtatgg
agggcttcttcttcatcgagacccttgccgtctttgttcggtggggtgagatcaaacgcg
aagccaggggctgcgcttgctgcagcagcggcagcgtctcggtcggtgccgaccccgcat
gctgccgcgatcaagtcgagaagggctgtcagtctccggaaggttatggacactggaaaa
tcgagttccctcgttggtgatgatcacgagattgtttcaaattcatccactggggactca
attgtagctgctacggagagaaacaggtctgatggtaaattggctgccgaagatgataac
gcgggtgattatcaatctgctttggaagatgaaatttccgcaagagataggaatttggag
actacaactgaggtttttcctagtaaagatttggcaggtgaagtagaagctgccgataaa
atggaggaattaaggataactaactatgagcaagatgccactacttcaatatccaactcg
accgtttacttacatttggacgacggctccaaaaatttgggttcagatgatagaaaagat
gaaatgatagcaactgtttcttctgatgaagattctaagtttgtggatgtgaatgattct
tgcgaagtggatattctgtcctcttctagggatgatgaccatggaaagtgtgagttgaat
tcgacaatgatgccactggaagagggagattatttggagaaagatctgcagagctctaaa
gatgatgagtctggtattactactggtggcggtgatgatgccagttcaattagtgaaatt
tcggagcttgtggaggagagaattgagcaactggagagtgagaggattagtaaaagagca
caaaagaaactcaggtccactatgaagccacttgaattggcagaagaacttgagaagaag
caggcttctaccggtttgcattgggaggagggtgcagctgctcagccaatgaagcttgag
ggtgttcggagaggatctactactttgggatactttgatattgatgctagcaatgccatt
acccgaaccattgcatctcaagcatttcggcgagatcatggttccccacaagtcctggca
gttcatcttaactacattgcagtgggaatggcaaaaggcgttattgttgtcgcttcaagt
agatactcttcttacagtactgacaacatggattcaaagatgctaatacttggtgtccaa
ggagatagatctcatgccccagtaacttccatgtgcttcaatcagcaaggggacctgctc
ttggctggttatggtgatggtcacattactgtttgggatgtccagagggcatcagctgct
aaagtcataactggggagcatatggcgccagtagtacatgcattgttcctaggccaggat
tctcaagttactcgtcaatttaaagcagttactggtgatagtaaaggtctggttctttta
catgctttctcagtggttcctttgcttaacaggttcaccatcaaaacacagtgtcttctt
gatggacaaagaacaggcactgtactatctgctttgccccttctttttgatgaatctgtt
ggaggcgctttgccatcatcacagggaaatgcttcactttcatccagcagcattggtaac
atgatgggaggtgtagttgggggagatgcaggatggaaactattcaatgagggctcttct
atggctgaagaaggtgtggtcatatttgtcacccatcaaactgctctggtggttaggctc
actcccactttggaagtctatgcacaactttccaagccagaaggagttcgggagggttcc
atgccttatactgcatggaaatgtactacacaatcacgcagttcgtcatctgaaaatatt
actgcagatgtggcagaacgagtttcattacttgctgttgcatgggatcggaaagttcaa
gttgcaaagttggttaaatcagagctcaaagtatttggaacatggtcccttgacagtgcg
gcaataggcgtggcttggttggatgctcatatgctggtggttctcacattgacaggacag
ttgtatttgtttgcaaaggatggtactgtgattcaccagaccagctttgctgttgatggt
tctggaggggatgatcatgttgcatatcatactcattttataaatatctatgggaatcct
gagaaagcctatcacaactgtgtagcggtaagaggagcttctatatatatacttggtccc
atgcatcttgttgtttccaggcttctcccttggaaggaacggattcaggttttgcggaga
gcaggcgactggatgggtgccttgaacatggcaatgacactttatgatggccaagctcat
ggtgttattgacctcccaagagccgtggatgctgtacaagaaatcataatgccttacctg
gtggagttgctattgtcatatgtagatgaagtattttcttatatttcagtggctttttgc
aaccaaattggaaaagtggaacaagatgaccagaagagtggaagcggttctgtgcactca
gaaataaaagaacaattcactcgcgttggtggtgttgcagtagaattttgtgtccatata
cagcggactgacattctttttgatgaaattttctccaagtttgtggcagttcaacataga
gatacatttttggagcttttggagccatatatattgagagatatgcttggatccctacct
cctgagattatgcaagctctagtagagcattatagcagcaaagggtggttgcaacgagtt
gaacaatgtgtccttcacatggacatttcttccttggatttcaatcaggttgtcaggcta
tgccgtgagcatggattatacggtgccttggtgtatcttttcaataaaggattggatgat
ttcagagcacctttagaggagttgttattagtttcacgaagtagtgatagagagagtgct
gttgcccttgggtacaggacgcttgtttatctgaagtattgcttttcaggtcttgccttt
ccaccagggcatggagctcttcctcctacacgtttgccatctcttaggacagaacttgtt
cagtttttattagagaattcgagtgccttgaattcacgagttgtgttgggcttgtcatca
agaggaacatatctgaacctgtaccatctcttagaattagatactgaagcaactttagat
gttctgaggttggcttttatggatgatgaaaatccaaaacctgaattcacttcacatgat
gttgctaatataaatatggaaaatgagcaggaaaatattacaacaattgaaagtcagaat
atattggttcaaaatactctaaatgctcttgttcaaatcattgaaaaagatgcatcccaa
gcagctgaacatgctagtagtgatgatactggatcagttgaagcgtggccttcaaagaga
gacatagggaacctatttgaattcattgcataccatgttgcatgtagaaaagcttatgtt
tcaagcagtgtgctgagtcagattttggagtatttgacatcagagagcaatttgtcagca
agttttcctgctcatgttatcaaaactttaaaaaggagagagaaacaggtgcttgcgctt
ctggaggtagtgcctgaaactgattggaactcatcttacgtgttacagctatgtgagaaa
gcacactatcaccaggtttgtggcttcattcacactatcagaaaccagtatcttgctgca
ttggatagctatatgaaagatgtggatgaaccagttcataccttcgcatatatcaacaat
acattaaggcagctaagtggcaatgaacgcgaagattttcaatcagctgttatgtctcgg
attccagagttggttgtgctgagcagagagggaactttcttgttagtcattgaccatttt
aatagcaacaattcacacatcttctctcaactacactcacatctgaaaagcctttttcta
tatctaaagacggtaattgaggttcacttgtttggaaccctcaatttttcacatttaaaa
aaggatgatgttctagatgcttttagtggaaggagagtgaaagatcagttgaaaggactt
gaagcttacttggaaagaatctcggaatttccaaagtttataaggaataaccctgtccat
gtagctgatgatatgatagagctttatatggagttattgtgtcagtatgaacgtgattca
gttctcaaattcctagagacttttgatagctatcgggtagaacactgtttgcgcttgtgc
caggaatatggcataacagatgcagctgcttttttgttagaaagagttggtgatgttggg
agtgctctttttctgacactttctggcctcaatgataaatttgctgtgcttgatacagct
gtgggaagtgtgatttcaactacaactttacgtggctctgctggcattgattattacagc
actgttttaaaaatgaaagaggttgatgaaatacgcagtatattgaactcctgtattggt
ttgtgtcagcgaaacacccctcgtttgcaacctgaggagtcagagacactatggttcaga
ttacttgattctttttgtgagcctttgatggattcacatgctgatgaaagggtattgaaa
gaaagtcatgttggaatgccagcagaaacattgggtgaacatgaggatgatgagcccata
atcaagtggaaaatctctaggtcccacaaaggtgcccatatcttaaggaaattgttctct
cagttcatcaaagagattgttgaaggaatgataggatatgttcgccttcctactatcatg
tcaaaattgctctctgacaatggtagccaggaatttggtgattttaaaattaccatattg
gggatgcttggaacatatggctttgagaggagaattctggatactgccaagtccttgata
gaagatgatacattctataccatgagtttactcaagaagggggcatctcacgggtatgcc
ccccggagtctcatatgttgtatatgcaactgccttctcaccaagggttcctctagtttc
caaattcaagttttcagttgcggtcatgcaactcatcttcaatgtgaacttctggaaagt
gactcttcaagtaaaggttccttgtctggatgccctgtttgtatgcctaagaagaatacc
cagagacctagaaataaatcaatccttcctgagaatggttcagtaaataaggtttcatca
agatcaaaacgatcacaaggaactagctttttacacctgcatgaagattcattggacagt
tcacagcaaatatcgcggtttgatatattgactaatcttcgaaaagaccagaaattagtc
cagatagagaacatccctcagttaaggcttgccccaccagctgtttatcatgaaaaggtg
aaagaaggacctgagcttttgacaggagagagtagcagcggtgctgcaaaaattgaaaaa
ccgagcaaaaggaggcaactcagggagctgaaagtgacagggtcatctcttcggtttcca
ttaaaatcaagtatatttggcaaggagaagatgaataaaaggtga
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integrated database retrieval system
