Humisphaera borealis: IPV69_03025
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Entry
IPV69_03025 CDS
T07075
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hbs
Humisphaera borealis
Pathway
hbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IPV69_03025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbs03019
]
IPV69_03025
03400 DNA repair and recombination proteins [BR:
hbs03400
]
IPV69_03025
Enzymes [BR:
hbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IPV69_03025
Messenger RNA biogenesis [BR:
hbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IPV69_03025
DNA repair and recombination proteins [BR:
hbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IPV69_03025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
Cas3-like_C_2
ResIII
Helicase_C_2
Ribosomal_S30AE
Motif
Other DBs
NCBI-ProteinID:
QOV90359
UniProt:
A0A7M2WY61
LinkDB
All DBs
Position
801043..802962
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AA seq
639 aa
AA seq
DB search
MSDPLRDQLQHTFGLDDFRPAQREVIEDIMAGKDVLCVMPTGAGKSLCYQFPAAIGGGLT
LVVSPLISLMSDQVRQLRDEGIPACLLNSTVSGAVRREIYDEIRNGFEGLLYVAPERFVM
DDFVELMQAVKPKIFAVDEAHCVSMWGHDFRREYMRLREFREKLGDPPCIALTATATEDV
REEIITNLGLRDPSVVVTGFDRPNLSYQCRPARPSVKIGELSDIFRKEPGSGIVYCSTRK
NVDEVTTKLSEQLKDRSVFAYHAGMDQAARTANQQRFMNTPGAVAVATNAFGMGINKPDI
RLVVHYNIPANIEAYYQEAGRAGRDGRPARCIILFSYADRHTQEFLIDKTGEENPDANFE
ALETLKQHAHEKLERLIRYCQRQVCRRRMILDYFGDESPVTDCRCDICLGHEQLAAAHAD
TDGEIVIPDELVLLVRKILSAIARMNGKFGVGMVAEVLKGEESEKLARWGLQNLSVFGLL
RELPTKRIMAMIYRVIDVGLAQQRNPPGVVGRPVVELTGPGVAVMKAQELPPVSLVDLLP
RKDDFSSKGTGTVRKKRYEAQASEMNADAQSRFEMLRKLRARLAVEKQVPTYVIFHDSVL
RSIAEADPKDEAGLSKIKGMGTFKLQEYGPMVLEALQSQ
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcccctgcgtgaccagcttcagcacaccttcggcctcgacgattttcggccg
gcgcagcgcgaagtgattgaagacatcatggccggcaaggacgtcctgtgcgtcatgccg
accggggcggggaagagtctttgctaccagtttccggcggcgattggtggggggcttacg
ctcgttgtttcgccgctgatttcgctgatgtcggaccaggtccgccagcttcgtgacgaa
ggaattcctgcctgcctgctgaacagcactgtgtcgggtgccgttcgacgcgagatctac
gacgaaatccgcaacggcttcgaaggcctgctctatgtcgcgcccgagcgattcgtgatg
gacgacttcgtcgagctgatgcaggcggtgaagccgaagatcttcgccgtcgacgaggcc
cattgcgtcagcatgtgggggcacgatttccgtcgggaatacatgcggcttcgcgagttc
cgcgagaaacttggcgatcctccttgcatcgcgctaacggcgaccgcgacggaagacgtc
cgcgaagagatcatcaccaacctcggcctgcgtgatccgagcgtggtggtcacggggttc
gatcgacccaacctcagctatcaatgccggccggccaggccgtcggtgaagatcggcgag
ctgtccgatatcttccgaaaggaaccgggcagcggcatcgtctactgctcgacacggaag
aacgtcgacgaagtcacgaccaaactttcggaacaactgaaggaccggtcggtgttcgca
taccacgccggcatggatcaggcggctaggacggcaaaccagcagcggttcatgaatacg
ccgggcgcggttgccgtggcgactaatgcgttcggcatgggcatcaacaagcccgacatc
cgcctggtggtccactacaacattcccgccaatatcgaagcctactaccaggaagccggc
cgcgccggccgtgacgggcggccggcacggtgcattatcctcttcagctacgccgaccgg
cacacgcaggagttcttgatcgacaagaccggcgaggagaaccccgatgccaacttcgag
gcgctcgaaaccctcaagcagcacgcccacgaaaagctcgaacgcctgatccgctactgc
cagcggcaggtgtgccggcggcggatgatcctcgattatttcggcgatgaatcaccggtc
acagattgtcgctgcgacatctgcctgggccacgaacaactcgccgcggcacacgccgac
accgacggcgagatcgtgattcctgatgagcttgtgctgctggttcgaaagatcctctcg
gcgatcgcccgcatgaacggcaagttcggcgtggggatggtcgccgaggtgctcaaaggg
gaagaatccgagaagctggcgcggtggggtctccagaacctgtcggtcttcgggctgctt
cgcgagctgccgacgaagcgcatcatggcgatgatctaccgcgtcatcgatgtcgggctc
gcccagcagcgcaatccgcctggcgtcgtcgggcggccggtggtcgaactcacgggcccc
ggcgttgcggtgatgaaagcacaggagctgccgccggtctcgctcgtcgatctgttgccg
cgcaaggatgacttcagcagcaaggggaccggcacggtccgcaaaaagcggtatgaggca
caggcctcagagatgaacgccgacgcccagtcgcggttcgagatgctgcgtaagctgcgc
gccagactcgccgtggagaagcaggtgccgacgtacgtcatctttcacgacagcgtgttg
cggtcgatcgctgaggccgatcccaaggacgaagcggggctatcaaagatcaaggggatg
ggcacgttcaagctgcaggagtacggaccgatggtgctcgaggctctgcagagccaatag
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