Humisphaera borealis: IPV69_03470
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Entry
IPV69_03470 CDS
T07075
Name
(GenBank) MiaB/RimO family radical SAM methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
hbs
Humisphaera borealis
Brite
KEGG Orthology (KO) [BR:
hbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbs03016
]
IPV69_03470
Enzymes [BR:
hbs01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
IPV69_03470
Transfer RNA biogenesis [BR:
hbs03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
IPV69_03470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QOV90439
UniProt:
A0A7M2WYD9
LinkDB
All DBs
Position
916800..918395
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AA seq
531 aa
AA seq
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MPRKLYLETFGCQMNVLDSELVLGQLRAQGYVSTEDRESADVILYNTCSVREHAEQKVWS
RLGELRQRKKDDPNLVIGVIGCMAERDGKNIFDKFPQVDILCGPGELDKLPGLIHNASVT
TLAKDEGGRMKDEGNPSSIHPSSVIAHPSGYRQVALMGANVRRSGTLDAAKDNLEMLDLS
RAISPEDDLAQAYVRITRGCNKFCTYCVVPYTRGPEVHRPPENIVDEVRRLADAGVREVT
LLGQTINHYHFKFGDGRETSFAELLYQIHEAVPHLPRLRFVTSFPRDFTDEALMAMRDCE
RICRYLHVPAQHGSDRILKIMNRGYTAQQYRDFIDRARGYMPDISIASDFIVGFPTETEE
EFQTCKDIIRHGRFKNSFIFKYSPRPGTIAIDRFTDDVPEDVKRRRNNELLAVQHEVSAQ
NNREMIGRTVQVLVEGQSKLVSKQQAAAYPKAPASGVELGWETRKKARLAEIQTIEPAVT
STQMVGRTSGDQVVVFDGEMSLKGRLLDVEIIDAKQMTLFARLAELPAVVP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcaagctgtacctcgaaaccttcggctgccagatgaacgtgctcgacagcgag
cttgtcttgggccagctccgcgcgcaaggctatgtctcgactgaagatcgagaatcggcc
gacgtcatcctctacaacacctgctctgtccgcgaacacgccgagcagaaggtgtggagc
aggcttggggagctgcgacagcgaaagaaggacgatccgaacctggtcatcggcgtcatc
ggctgcatggccgagcgcgatggcaagaacatcttcgacaagttcccgcaagtcgacatc
ctgtgcggtcccggggagttggataagctgcccggtctgatccacaacgccagcgttacc
acgctggcgaaggatgaaggcggaaggatgaaggatgaagggaatccttcttccattcat
ccgtcatccgtcatcgctcatccttccggctaccgtcaggttgccctgatgggcgccaat
gttcgccggtctggcacgctcgacgccgccaaggacaacttggagatgctcgacctgtcg
cgggcgatcagtccggaagacgacctggcgcaggcgtacgtccgcattacccgcgggtgc
aacaagttctgcacctactgcgtggtgccgtacacacgcgggcccgaggtccaccgtccg
ccggagaacatcgttgatgaggtccgccgtctcgccgacgccggcgtgcgcgaagtgacg
ctgctcgggcagacgatcaaccactaccattttaagttcggcgacggccgagagacttcg
ttcgccgagctgctctaccagatccatgaagccgtcccgcatctgccacggctgcgcttc
gtcaccagcttcccgcgcgacttcaccgacgaggcgctcatggcgatgcgcgactgcgag
cgcatctgccgttacctgcacgtgccggcacagcacggcagcgaccgcattctcaagatc
atgaaccgcggctacaccgcccagcagtaccgcgacttcatcgaccgcgcccgcggctac
atgcccgacatctcgatcgcgtccgacttcatcgtcggcttcccgaccgagaccgaggaa
gagttccagacctgcaaggacatcatccgccacggccgattcaagaacagcttcattttc
aagtactcaccaaggccggggacgattgcgatcgaccgcttcaccgatgatgtgcccgaa
gacgtcaaacgccggcggaacaacgagctgcttgcagtgcagcatgaagtcagcgctcag
aacaaccgggagatgatcggccggacggtgcaggttctggtcgaaggccaaagcaagctg
gtcagcaagcagcaggctgcggcttaccccaaagcgcctgcaagcggcgtggagctggga
tgggagacccgcaagaaggcccggctcgccgagattcaaacgattgagcccgccgtcacc
agcacccagatggtcggtcgcacgtcgggcgatcaagtcgtcgtgttcgacggggagatg
tctctgaaggggcggttgctcgacgtcgagatcatcgacgcgaagcagatgacgttgttc
gcgcggttggccgagctgccggctgtcgtgccatag
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