Humisphaera borealis: IPV69_26640
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Entry
IPV69_26640 CDS
T07075
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hbs
Humisphaera borealis
Pathway
hbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IPV69_26640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbs03019
]
IPV69_26640
03009 Ribosome biogenesis [BR:
hbs03009
]
IPV69_26640
Enzymes [BR:
hbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IPV69_26640
Messenger RNA biogenesis [BR:
hbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IPV69_26640
Ribosome biogenesis [BR:
hbs03009
]
Prokaryotic type
rRNA helicases
IPV69_26640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
WSD
G1RFP
Motif
Other DBs
NCBI-ProteinID:
QOV89721
UniProt:
A0A7M2WY33
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All DBs
Position
7065941..7067674
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AA seq
577 aa
AA seq
DB search
MAADVEEVVESGATDGFGGLGLDAGLIKTLSDLGYEEPTPIQRETIPPLLAGRDLIGQAA
TGTGKTAAFALPILQRIAAAGKDRPRPSALVLVPTRELAMQVAEAMHKYGNRLKVTTIPI
YGGHSFGQQAQALQRGVDVVVATPGRAVDHIGRKTMNLSGISVLALDEADEMLDMGFADD
LETILSATPETRQTIFFSATLPPRIAGMAKRYLRDPLRIHIEQEKPTKGIAPKVRQTAYI
IPRSRKLEVLGRVLDMEDPRSALIFCRTRTEVDSLTERLNAHGYRAQSLHGGITQDQRSR
VIKRLKDGAIDLVVATDVAARGLDIENLALVVNYDVPANPDAYVHRIGRVGRAGREGVAV
TLVDPRESRLLGQFARQAGGRIETALVPTVTDLRAKRLELTRAAIREAILAGGLDRYRVA
VESLAQEHDLMTVALACVKLAHKAAGGDRDDGEDGDPSRPSGPTGGKSGGAKPASARTTA
ASPGSAAPVEEEPAAAMSRLYVGVGRTDGILPQHIIAAITGLTGIMGEQIGTVEIADRHS
VVEVPESLVEKVIYGMRKCRIRGRKAAVRRFLDNRQP
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgatgtcgaggaagtcgttgaatctggtgcaaccgacggttttggaggtctc
ggcctggatgccgggctgatcaagacgttgtctgatctcggctacgaagagccgacaccg
atccagcgagagaccattccgccgttgctcgccgggcgcgatctgatcgggcaggccgcg
acgggtaccggtaagacggcggcgttcgcgttgccgatccttcagcgcatcgccgccgcg
ggcaaggaccgtccgcggccgtcggcgctggtgctcgtgccgacgcgcgaactggcgatg
caggtcgccgaggcgatgcacaagtacggtaaccggctgaaggtgacgacgatcccgatc
tacggcgggcactcgttcgggcagcaggcgcaggcgctgcagcggggcgtggacgtggtg
gtggcgacgccgggacgggcggtcgatcacatcggtcgcaagacgatgaacctgagcggc
atctcggttctggcgctggacgaagccgacgaaatgctggacatggggttcgccgacgac
ctggagacgatcctgtcggcgacgccggaaacgcggcagacgatcttcttttccgcgacg
ctgccgccgcgcatcgccgggatggccaagcggtacctgcgtgacccgctccgcatccac
atcgagcaggagaagccgaccaagggcatcgcgccgaaggtccgccagacggcgtacatc
attccgcgcagccgcaagctggaggtgctcggccgggtgctcgacatggaagacccgcgg
tcggcgttgatcttctgccgcacgcggaccgaggtggacagcctgaccgaacggctcaac
gcgcacggttaccgggcgcagtcgctgcacggcggcatcacgcaggaccagcgcagccgg
gtcatcaagcgactgaaggacggcgcaattgacctggtcgttgccactgacgtggcggcg
cgaggcctggacatcgagaacctggcgctggtggtgaactatgacgtgccggccaacccc
gatgcgtacgtgcatcgcatcggccgcgttggccgggcggggcgcgagggtgtcgcggtc
acgctggtcgatccgcgcgagtcgcgcctgctgggccagtttgcgcgtcaggcgggtgga
cggatcgaaacggcgctggtgccgaccgtcaccgatctgcgggccaagcgactggagctg
acccgcgccgcgattcgcgaagcgattctcgccggcgggctcgaccggtatcgcgtggcc
gtcgaatcgctggcgcaggagcacgatctgatgacggttgcgctggcgtgtgtgaagctt
gcccacaaggcggccggcggcgaccgggacgacggcgaggacggcgacccgtcccggcct
tccggcccgaccggcggcaaatccggcggcgcgaagcccgccagcgctcgcacgaccgcg
gccagccccggcagtgccgcacccgttgaggaagaaccggcggcggcgatgtcgcggctg
tatgtcggtgtcggccgaaccgacggcatcctgccgcagcacattatcgcggcgatcacc
gggctgaccggcatcatgggagagcagatcggcaccgtggaaatcgccgaccgccattcg
gtcgtcgaagtgcccgagtcgctggtcgagaaagtgatctacggcatgcggaagtgccgc
atccgcggccggaaggcggcggtgcggcggttcctggataaccgccagccttga
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