Hyperthermus butylicus: Hbut_0518
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Entry
Hbut_0518 CDS
T00468
Name
(GenBank) universally conserved protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
hbu
Hyperthermus butylicus
Brite
KEGG Orthology (KO) [BR:
hbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbu03016
]
Hbut_0518
Enzymes [BR:
hbu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Hbut_0518
Transfer RNA biogenesis [BR:
hbu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Hbut_0518
Prokaryotic type
tRNA splicing ligases
Hbut_0518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Put_DNA-bind_N
Motif
Other DBs
NCBI-ProteinID:
ABM80380
UniProt:
A2BK69
LinkDB
All DBs
Position
501274..502728
Genome browser
AA seq
484 aa
AA seq
DB search
MSARIPLRKISEFEWEIPKGAKPCMKVPSIIFADEFLLEKMKGDLTLVQAANVACLGGIQ
KYSIVMPDGHQGYGFPIGGVAAMAVDEDGVISPGGVGYDINCGVRLIRTNLDIKDVKPKL
RELIDELFRNIPSGLGSSGKIRLSIQELNKVLDEGVEWAVQRGYGWAEDPDHIEERGSWT
AADSSKVSDRAKRRGAEQLGTLGSGNHFLEVQVVDKIYDPKLAEAMGITHEGQVMVMVHT
GSRGLGHQVASDYLMIMERAMRKYGIRPPDRELASVPFNSREGQDYFKAMAAAANFAWTN
RQLITYWARESFKKVFHRDPDQLDMVIVYDVAHNIAKLEEHDVDGKRKQLIVHRKGATRA
FPPGHPQIPKDYQAIGQPVLIPGSMGTASYVLVGVPTGARAWYTAPHGAGRWLSRAAAKR
MKSYTQVVRELEAKGILIRASDRATVVEEMPQAYKDVDRVALVAHRVGIAKMVVRLRPLA
VTKG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgccaggattccactccgtaaaatcagcgagttcgaatgggaaatacccaagggc
gctaagccctgcatgaaggtcccatccataatctttgcagacgagtttctgctcgaaaaa
atgaagggtgacctaacactggtccaggcagccaatgtggcatgtctcggcggcatacag
aagtacagcattgtgatgcccgacggacaccagggctacggtttccccataggcggcgta
gcagccatggccgttgacgaggacggtgtcataagccctggcggcgtgggctacgacatc
aactgtggtgtacgcctcataaggactaacctagacataaaggatgtcaagcctaagcta
cgcgagctaatagacgagctattccgcaacataccaagcggccttggtagtagcggcaag
atcaggctgagcatccaggagctaaacaaggtgctagatgagggtgtcgagtgggccgta
cagaggggctacggctgggctgaggacccagaccacatagaggagaggggtagctggaca
gctgcagactccagcaaggttagcgaccgtgccaagaggcggggcgcagagcaactaggt
acgctcggcagcggcaaccacttcctagaggtgcaagtggtagacaagatctacgacccg
aagctagccgaagccatgggcataactcatgaaggccaggtaatggtgatggtccacaca
ggcagcagaggcctgggtcaccaggtcgcgagcgactacctaatgataatggagcgcgcc
atgagaaagtatggtataaggccgccagaccgtgagctggcaagcgtaccattcaacagc
agggagggtcaagactacttcaaggcaatggctgcagcggccaactttgcctggacaaac
aggcagctaatcacctactgggccagggagagcttcaagaaggtcttccaccgcgacccc
gaccagctagacatggttatagtctacgacgtagcccacaacatagccaagctagaagaa
cacgacgtagacggcaagaggaagcagctaatagtacaccgtaaaggcgccactcgtgcc
ttcccaccgggacacccacagatacccaaggactaccaggccataggccagccagtactc
attccgggcagcatgggtacagcaagctacgtactggtaggcgtcccaacaggtgcaagg
gcatggtacacagcgccacacggagctggcagatggctgagcagagcagcagctaagaga
atgaagagctacacccaagtagtaagagagctagaagctaaaggtatactcataagggca
agtgatcgtgccaccgtagttgaggaaatgccgcaggcatacaaggacgtagatagggta
gccctagtggcacatcgcgtaggcatagccaagatggtagtcagactacgtccactagca
gtaacgaagggttag
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integrated database retrieval system
