Hyperthermus butylicus: Hbut_1193
Help
Entry
Hbut_1193 CDS
T00468
Name
(GenBank) predicted Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hbu
Hyperthermus butylicus
Brite
KEGG Orthology (KO) [BR:
hbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbu03400
]
Hbut_1193
DNA repair and recombination proteins [BR:
hbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hbut_1193
Archaeal homologous recombinant proteins
Hbut_1193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
Rad50_zn_hook
AAA_13
AAA_15
COG3_N
AAA_21
BLOC1_2
SbcC_Walker_B
AAA_29
AAA_27
ABC_tran
ABC_tran_CTD
Syntaxin
DUF1664
TMF_TATA_bd
Prefoldin_2
Sec10_N
Med9
MapZ_EC1
YlqD
Phage_GP20
Uso1_p115_C
AAA_16
PDH_C
DUF6011
FliD_N
GAS
GTP_EFTU
CTU2
Parvo_NS1
CCDC93_CC
Exonuc_VII_L
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABM81027
UniProt:
A2BM16
LinkDB
All DBs
Position
1201954..1204617
Genome browser
AA seq
887 aa
AA seq
DB search
MIIEAVELENFLSHRYTKVELGRGIVAVVGPNGAGKTSIVDAITYALFNIHSRDTRNKKE
PLIRLGAPAAKIIVEFSVGKKRYRVHKTVYRGATPTQATLYLLEDGKPRLVARGVESVSR
EIARIVGFDPQLADVIMVTRQGEIEKILVDKKARIEAINTLLKLRAMEKTYDRMRDLISR
VSRRLEYYRGRHIELERELKRLREEAARYEEARRELERVSAELEEVRRKLDEAKHELERV
EELRREYEDLNYRLGLLEAAIKRDKERLAELEREYREARAAEEELEALRGALEVARKVRE
VRQLLVKRRQLEAHLEAIEKGLENFEADEDMLRNLEEVVRRYEELEEKLRELEDVNREYM
IVEKQLENIEKDIRRVEEERDKARSKLYALLQSSLPVEPPSEVSKLLEFIDSLVHDIDKR
IEQLRARKEAVVGQVSAKLNEKEYIEGILLKLTSASGRCPLCGRPLTEEHRMTLISKFRS
EKRGVETEIKRLEAQKQTIEAEITRLEQQRERIRELGKKIRELVSQVSQLEARLEELRTE
QAKLSERRLELFEKHKEYEEARKELEKLGQAVVEYRVLKRRLEELEKRRVEAERLREELR
RLDEKIGTLLGELGVDASGLDELEERVSHLLEMVAELRSKASRRPELERRLDEVRRRLED
YEEEYNSVAGRLEELKGIEEEYEKLRSLVESLEERYREKVAEYSKLRGIVDELEKSVKRL
KLVEEEYRRVSEKLERYSHAKRALERIRAVIGPEGLQRIVRQAIRNSLEYHLRQILSAFN
IDFVDVKLDDEYSVTLITRAGEKTVSMLSGGEKIALAIAYRLALARLVGSRIESLIMDEP
TVHLDAEKRRELVNIIKQSLSVTGLAQMIVVTHDREVEDVADRVIEV
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgatcatagaggctgttgagctggagaacttcctcagccatcgctacaccaaagtcgag
cttggcagaggcatagtagccgtagttggacccaatggtgcaggcaagacaagcatcgtt
gacgccataacatatgcactattcaacatacactcgcgcgatactcgcaacaagaaggag
cccctcatacgcctcggtgctcctgctgcaaaaataatagtagagttcagcgttggcaag
aaacgttaccgtgtacataaaacagtgtatcgtggcgcaacacctactcaggcaactctc
taccttctcgaggatggtaagccccggcttgttgcgcgcggagttgagagtgtttctaga
gagatagccagaattgttggttttgacccacagctagcagatgtgatcatggttactagg
cagggtgagatagaaaagatactcgtagacaagaaggctcggatagaggcgattaatact
cttctaaagctgcgagcaatggagaaaacctatgatagaatgcgggatctcataagcagg
gtttctaggaggctagaatactaccgtggaagacacattgagcttgagagggagttgaag
aggctacgagaggaggctgcaaggtatgaagaggcaaggagggagctggagagggttagt
gctgagctggaggaggtacgtagaaagctcgatgaggccaagcacgagcttgaaagagtt
gaagagcttaggagagagtacgaggatctcaactatcgtctcgggttgctcgaggcggct
attaagagggataaggagcgtcttgctgagcttgagagagagtatagggaggcaagagca
gctgaggaagaacttgaagctcttcgtggcgctttagaggttgcgaggaaagtgcgtgag
gttaggcaactgctagtgaagcggagacaacttgaagctcaccttgaggccatcgagaaa
ggacttgaaaactttgaagctgatgaggatatgttaagaaatctcgaagaggttgttagg
aggtatgaagagctagaggagaagctccgggagctagaagatgtaaatagggagtacatg
attgtggaaaaacaactggagaatattgagaaagacattaggcgcgttgaagaggagcga
gataaggctaggtcaaagctatatgctctgcttcagtcaagcctgcccgtggaaccaccc
agcgaagtctccaagctacttgagtttatagactctcttgtacacgacattgataagaga
atcgagcagctgcgagcaaggaaggaggctgttgtaggccaagttagtgctaagctgaac
gagaaggagtacattgagggcatactgttgaagcttacgagtgctagtggaaggtgccct
ctctgcggccgccccctaacggaggagcaccgaatgacgcttatctcgaagtttaggagt
gaaaaaagaggcgtggagaccgagattaagagacttgaagcgcaaaagcagaccatagag
gcagagataacgaggcttgaacaacagagggagcgtataagggagcttgggaagaagatt
cgcgagcttgttagccaggttagccagctcgaggctaggcttgaggagttacgtactgag
caggctaagcttagcgagaggcgactcgaactctttgaaaagcataaagagtacgaggag
gctaggaaggagctggagaagcttgggcaggcagttgtagagtatagggttctcaagcgt
aggcttgaagagcttgagaagcgtagggtagaagctgagcgactccgcgaggagcttagg
agacttgatgagaagattggtactttacttggagagcttggggttgatgctagtggcctg
gatgagcttgaggaaagggtttcacaccttctcgagatggtggctgagctgaggagtaag
gcttcaaggagacccgagcttgaaaggagacttgacgaggttaggaggaggcttgaggac
tacgaggaggaatataacagtgttgctgggaggcttgaggagcttaagggcatcgaagag
gagtatgagaagttgagaagcctcgtcgagagccttgaggagaggtatcgtgagaaggta
gctgagtactcaaagctccgcgggatagtggacgagctggagaagagtgtaaaaaggctt
aagctcgttgaggaagagtatagacgtgttagcgagaagctcgagcgttatagccatgca
aagagagcgctggagcgtatccgtgccgttataggccctgagggcttacagaggattgtc
cgtcaggccatccgtaatagtcttgagtaccatttgcgccagatactctcagcctttaac
atagactttgtcgatgtaaaactggacgatgagtacagtgttacgctgattacgagggct
ggcgagaagaccgtctcgatgctcagtggaggtgaaaagatagcgctagctatagcatat
aggctggctctagcaaggctagttgggagccgcatagagtcactcataatggatgagccc
actgtacaccttgacgctgagaagcgtagagagctagtgaacatcattaagcagagtctg
agtgttacagggctagcacaaatgatagttgttacgcatgaccgggaggttgaggatgtt
gctgatagagttatagaggtttaa
DBGET
integrated database retrieval system
