Hyperthermus butylicus: Hbut_1604
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Entry
Hbut_1604 CDS
T00468
Name
(GenBank) transcription antiterminator
KO
K15172
transcription elongation factor SPT5
Organism
hbu
Hyperthermus butylicus
Brite
KEGG Orthology (KO) [BR:
hbu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Hbut_1604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbu03021
]
Hbut_1604
03019 Messenger RNA biogenesis [BR:
hbu03019
]
Hbut_1604
Transcription machinery [BR:
hbu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Hbut_1604
RNA polymerase I system
Hbut_1604
Messenger RNA biogenesis [BR:
hbu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Hbut_1604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW2_Spt5
KOW4_SPT5
DUF4978
KOW5_SPT5
Ribosomal_uL24m-like
Motif
Other DBs
NCBI-ProteinID:
ABM81423
UniProt:
A2BN62
LinkDB
All DBs
Position
1606216..1606734
Genome browser
AA seq
172 aa
AA seq
DB search
MSQPAEEIPGEARSEEQERRLQPRLYAVRTVAGREIDVALIMEQRARDQNMPIYAIIVPP
QIKGYVIVETPAAFYATNAIQGIRYAKGVVPGVLRYEDVERLLKPKAVIETLKPGDIVEI
ISGPFRGMKGQVVRVSPSKNEVVLNVLEVEYPLQITVPGDSVRPSKEERGSR
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgagccagccggctgaggagatacccggagaagctaggagtgaagagcaagagagaagg
ctgcagccgagactttacgctgtgagaaccgtagcgggccgtgagatagacgtcgccctc
ataatggagcagcgagccagggaccaaaatatgccaatatatgcgatcatagtcccccca
cagatcaaaggctacgttatcgttgagacgccagctgcattctatgccacaaatgctatt
cagggcataaggtatgctaagggtgtcgtaccaggtgtgctaaggtacgaggatgttgag
agactactcaagccaaaggcagtaatagagacactaaagcctggcgacattgttgagatc
atctcgggccccttccgcggcatgaagggccaggtggtacgtgtatcgcctagcaagaat
gaggtagttttaaatgtgctagaggttgaatacccactccaaatcacggtgccaggtgac
tcggtaaggccgagtaaggaggagagagggagcaggtaa
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