Halarcobacter bivalviorum: ABIV_0136
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Entry
ABIV_0136 CDS
T06437
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hbv
Halarcobacter bivalviorum
Pathway
hbv00300
Lysine biosynthesis
hbv00470
D-Amino acid metabolism
hbv01100
Metabolic pathways
hbv01110
Biosynthesis of secondary metabolites
hbv01120
Microbial metabolism in diverse environments
hbv01230
Biosynthesis of amino acids
Module
hbv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hbv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABIV_0136 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABIV_0136 (dapF)
Enzymes [BR:
hbv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ABIV_0136 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
FilR1_middle
Motif
Other DBs
NCBI-ProteinID:
AXH11175
UniProt:
A0AAX2A5F7
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All DBs
Position
complement(137664..138404)
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AA seq
246 aa
AA seq
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MTYTKYSASGNDFVIFHTFVEEDFSNKAIELCNRTEGIGADGLVALIPSKDADFKWLFYN
SDGSVAAMCGNATRAVAHYAYNNGLANSSMKFLTQAGLIESIVEDDVVQTQMTEPKIIKD
SFEQEGFTWYLIDTGVPHLVTIVDDLKAYDHDLCAKMRYEHNANVNLVKVEDKKLYVRTY
ERGVEGETKACGTGMVACFLRALDLNLVDKKALVYPKSQEELTISKIDGKIYFKGAVKKV
FTTTIG
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacatatacaaaatactctgcaagtggaaatgactttgtgatttttcacacttttgtg
gaagaagatttttcaaacaaagcaattgaactatgtaatagaacagaaggaattggtgca
gatggtttagtagcacttattccaagtaaagatgcagattttaaatggttattttataat
agtgatggaagtgttgcagctatgtgtggaaatgcaacaagagcagttgctcattatgct
tataataatggcttagcgaactcttcaatgaaatttttaacacaagctggacttatagaa
tcaattgtagaagatgatgtagtacaaactcaaatgactgaacctaaaattattaaagat
agttttgaacaagaaggatttacttggtatttaatagatactggtgttcctcatttagta
actattgtagatgatttaaaagcatatgaccatgatttatgtgcaaaaatgagatatgaa
cataatgcaaatgtaaatcttgtaaaagttgaagataaaaaactttatgtaagaacttat
gaaagaggtgtagaaggagagacaaaagcttgtggaacaggtatggttgcttgtttttta
agagctcttgatttaaaccttgtagataaaaaagctcttgtttacccaaaaagtcaagaa
gagctaactatctctaaaatagatgggaaaatctattttaaaggtgcagttaaaaaagtt
tttacaacaacaataggataa
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