Halarcobacter bivalviorum: ABIV_0534
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Entry
ABIV_0534 CDS
T06437
Symbol
groEL
Name
(GenBank) 60 kD chaperonin (cpn60)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hbv
Halarcobacter bivalviorum
Pathway
hbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABIV_0534 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbv03019
]
ABIV_0534 (groEL)
03110 Chaperones and folding catalysts [BR:
hbv03110
]
ABIV_0534 (groEL)
03029 Mitochondrial biogenesis [BR:
hbv03029
]
ABIV_0534 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hbv04147
]
ABIV_0534 (groEL)
Enzymes [BR:
hbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ABIV_0534 (groEL)
Messenger RNA biogenesis [BR:
hbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABIV_0534 (groEL)
Chaperones and folding catalysts [BR:
hbv03110
]
Heat shock proteins
HSP60 / Chaperonin
ABIV_0534 (groEL)
Mitochondrial biogenesis [BR:
hbv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ABIV_0534 (groEL)
Exosome [BR:
hbv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABIV_0534 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
ABIV_0534 (groEL)
Exosomal proteins of breast cancer cells
ABIV_0534 (groEL)
Exosomal proteins of colorectal cancer cells
ABIV_0534 (groEL)
Exosomal proteins of bladder cancer cells
ABIV_0534 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
ParM_N
Motif
Other DBs
NCBI-ProteinID:
AXH11555
UniProt:
A0AAX2A5R0
LinkDB
All DBs
Position
532172..533803
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AA seq
543 aa
AA seq
DB search
MAKEITFSDNARNKLFSGVEKLADAVKVTMGPRGRNVLLQKSFGAPTITKDGVSVAREIE
LADTLENMGAQLVKEVASKTADEAGDGTTTATVLAHSVFKEGLRNVTAGANPISLKRGMD
KACEAILANLKASSKVIADKTEIEQVATISANSDKAIGSMIAEAMDKVGKDGVITVEEAK
GISDELDVVEGMQFDRGYLSPYFVTNSEKMIAELENPFILLYDKKISSLKEMLPILESVN
QSGRPLLIVAEDVDGEALATLVVNRLRGSLNIAAVKAPGFGDRRKAMLEDIAVLTGGTVI
SEEMGMKLETAEFSCLGTAARVVIDKDNTTIVDGTGSAEMVQNRVNQIKAEIENTTSDYD
REKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATRAAVEEGIVIGGGAALIR
AAAKVNLELEGDEQIGADIVLRAIKAPMKQIATNAGFDAGVVVNEVEKSDNENFGFNAAT
GEYVDMFEAGIVDPAKVERVAMQNAVSVASLLLTTEATVTDIKEDKAGPAMPDMGGMGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagattacttttagtgataatgcaagaaataaattattctcaggtgttgaa
aaattagcagatgcagtaaaagttacaatgggacctagaggaagaaatgtacttttacaa
aaatcatttggtgctccaacaattacaaaagatggtgtatctgttgcaagagagattgaa
ttagctgatacattagaaaatatgggagctcaattagtaaaagaagttgcttctaaaaca
gcagatgaagctggtgatggaactacaactgcaacagttttagctcactctgtatttaaa
gagggactaagaaatgttactgctggtgcaaaccctatctctttaaaaagaggaatggat
aaagcttgtgaagctattttagctaacttaaaagcttcatcaaaagttattgctgataaa
actgaaattgagcaagttgctacaatctctgcaaattcagataaagcaattggttctatg
attgctgaagcaatggataaagttggaaaagatggtgttattactgttgaggaagcaaaa
ggtatttcagatgagttagatgtagttgaaggtatgcagtttgatagaggatatttatct
ccatactttgtaactaattctgaaaaaatgattgctgaattagagaatccatttattctt
ttatatgataaaaaaatctctagcttaaaagagatgttaccaattttagagtctgtaaat
caatcagggagaccactattaattgttgcagaagatgtagatggtgaagcattagctaca
ttagttgtaaatagattaagaggttctttaaatattgctgctgttaaagcaccaggattt
ggtgatagaagaaaagcaatgttagaagatattgctgtattaactggtggtactgttatt
tctgaagagatgggaatgaaacttgaaactgctgagttctcttgtttaggaactgctgca
agagttgtaattgataaagataatacaacaattgtagatggtacaggaagtgctgaaatg
gttcaaaatagagttaaccaaattaaagcagagattgaaaatactacttcagattatgat
agagaaaaacttcaagaaagacttgctaagctttctggtggtgttgctgtaattaaagta
ggtgctgcaacagaaacagaaatgaaagagaaaaaagatagagttgatgatgctttatct
gcaacaagagctgcagttgaagaaggtatcgtaattggtggtggagctgcattaattaga
gctgctgctaaagtaaacttagaacttgaaggtgatgagcaaattggtgcagatattgta
ttaagagctattaaagcaccaatgaaacaaattgcaacaaatgctggatttgatgctggt
gttgttgtaaatgaagttgaaaaatctgataatgaaaactttggatttaatgctgctact
ggtgaatatgttgatatgtttgaagcaggaattgttgacccagcaaaagttgaaagagtt
gcaatgcaaaatgcagtatctgtagcttcattattattaactacagaagcaactgtaaca
gatattaaagaagataaagcaggaccagcaatgccagatatgggtggaatgggaatgcca
ggaatgatgtaa
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