Halarcobacter bivalviorum: ABIV_0564
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Entry
ABIV_0564 CDS
T06437
Symbol
cadF
Name
(GenBank) outer membrane fibronectin-binding protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
hbv
Halarcobacter bivalviorum
Brite
KEGG Orthology (KO) [BR:
hbv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hbv02000
]
ABIV_0564 (cadF)
Transporters [BR:
hbv02000
]
Other transporters
Pores ion channels [TC:
1
]
ABIV_0564 (cadF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
TSP_3
OprF
OmpA_membrane
CUT_C
Motif
Other DBs
NCBI-ProteinID:
AXH11585
UniProt:
A0AAX2A4R4
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All DBs
Position
complement(568727..569734)
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AA seq
335 aa
AA seq
DB search
MKKIILSAALCASLAFAANSEYKYEITPLVGGNITEGNLNLDDHYGVGGLSFGVNFDDTL
YDQIEVGILTSLEQVDYDGINEDTNITRLFTNFVKDYGLTENTSLYALVGVGLEHFENEE
LGNKTSLFGNYGVGLKYKFSNDMALKTDIRHLINTNDRDNNLIYTVGLAIPFGEKAAPAP
KEEKVEPKPAIAKLADTDGDGVPDIKDKCPDTPKGDIVDENGCSLKVNLNINFDFDSARI
NNEYDSKIKKFADFMKKFPSVKGKIEAHTDSVGTEDYNQKLSERRAAATVKALEEQGVDK
SRLNSTGYGESKPKATNETAEGRAENRRVEGSIQR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattattttatcagcagcattatgtgcttctcttgcattcgcggcaaatagt
gagtacaaatatgagattacacctttagttggtggaaatattactgaaggtaacttaaac
ctagatgaccattatggtgttggtggtttaagttttggtgtaaactttgatgatacttta
tatgatcaaattgaagttggaattttaacttctttagagcaagttgattatgacggtatt
aacgaagatacaaacattacaagattatttactaactttgtaaaagattatggtcttact
gaaaacacttctttatatgctttagttggggttggtttagagcattttgaaaatgaagag
ttaggaaataaaacttctctatttggaaactatggggttggtttaaaatataagttctct
aatgatatggcattaaaaactgatattagacacctaatcaatacaaacgatagagataac
aacttaatctatactgttggtttagcaattccatttggtgaaaaagctgctccagctcca
aaagaagagaaagttgagccaaaaccagcaattgcaaaacttgcagatacagatggagat
ggtgttcctgatattaaagataaatgtccagatactccaaaaggtgatatcgttgatgaa
aatggatgttctttaaaagtaaacttaaacatcaactttgattttgacagtgcaagaatc
aataatgagtatgattcaaaaatcaaaaaatttgctgattttatgaaaaaattcccttct
gtaaaaggaaaaattgaagcacacactgactcagttggtacagaagattataaccaaaaa
ctttctgaaagaagagctgctgctacagttaaagctttagaagagcaaggtgttgataaa
tcaagacttaactctacaggatatggtgaatctaaacctaaagcaacaaatgaaactgct
gaaggtagagctgaaaacagaagagttgaaggttcaattcaaagataa
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