Halarcobacter bivalviorum: ABIV_0648
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Entry
ABIV_0648 CDS
T06437
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hbv
Halarcobacter bivalviorum
Pathway
hbv03420
Nucleotide excision repair
hbv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABIV_0648 (rep)
03430 Mismatch repair
ABIV_0648 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbv03400
]
ABIV_0648 (rep)
Enzymes [BR:
hbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABIV_0648 (rep)
DNA repair and recombination proteins [BR:
hbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABIV_0648 (rep)
MMR (mismatch excision repair)
Other MMR factors
ABIV_0648 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AXH11661
UniProt:
A0AAX2AA65
LinkDB
All DBs
Position
complement(653793..655841)
Genome browser
AA seq
682 aa
AA seq
DB search
MPLSNLNKEQLEAATCEKGFNLIIASAGTGKTSTIVGRIANLINNGVQPDEILLLTFTNK
AAAEMVQRVAKFFGKDMAAKIMAGTFHSVSYKLLKQLNKNITLKQPNELKTLFKSLYEKR
VFYEREDGVNPYDGGYLYDMYSLYLNSNEGESFEDWIKNKNPDHELYTAIYEDVVLEFNE
LKSKYGYANFDDLLTIMLDTLKEEEFDFKEILVDEYQDTNPLQGRLLDSFRPKSLFCVGD
YDQSIYAFNGSDIGIISTFSTRYPGSKVYTLRKNYRSSKPILDLATKVIEHNERIYEKQL
QVMRTDVSIPPKLLEFTELFAQYHHIAEKISQSSTSHSDIAIIFRNNSSADGIEANLREY
GIPAKRKGGMSFFDSVEIKFVLDILVMQLSHNDMMAFIHVLEHGKGIGKAIAKDIFDALV
KLGHGDVFKGLFTPDSSINNPYQSNRVKNIQLGLFDDFIELGSVSKFKDCGFEEAFLSNP
ILKHPKLSVDGAKYLYDFYLLMKQIRRTKVPDSLVSSVTSSMMYSRLKESLATKRATQKD
GNVNIIQKTKALAKINRKVMLLRNLARNFQDLSKFVNSMILGGGEMSEGEGVNLLSVHAS
KGLEFKEVFVIDLMDGRFPNRKLMSKGGSIEEERRLFYVAVTRAKDVLYLSFAKYDKIKK
LDFVYSPFLKEAGLIKKEHPEE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgcccctatctaatttaaataaagaacaactcgaagctgcaacctgtgaaaaaggcttt
aatcttattattgctagtgcaggaacaggtaaaacctcaactattgttggaagaattgca
aacttaatcaataatggtgtacaaccagatgaaattttattattaacttttacaaataaa
gctgctgcagagatggtacaaagagttgctaaattttttggaaaagatatggcagcaaaa
attatggcaggaacttttcactcagtttcatataaattattaaaacaattaaataaaaat
attacacttaaacaaccaaatgaattaaaaactctttttaaatctttatatgaaaaaaga
gtattttatgaaagagaagatggagtaaatccttatgatggtggatatttgtatgatatg
tattcactatatctaaactctaatgaaggtgaaagttttgaagactggattaaaaataaa
aatccagaccatgaattatatacagctatttatgaagatgttgttttagagtttaatgag
ctaaaaagtaaatatggttatgcaaattttgatgacttacttactattatgcttgatact
ttaaaagaagaagagtttgattttaaagaaatcttagtggatgaatatcaagatacaaac
cctttacaaggaagattacttgattcttttagaccaaaatctctattttgtgtaggagat
tatgatcagagtatttatgcttttaatggttcagatattggaattatttcaactttttct
acaagatatccaggttcaaaagtatatacgttaagaaagaattatcgttctagtaaacct
attttagaccttgccacaaaagttatagaacataatgaaagaatctatgaaaaacaactt
caagtaatgagaactgatgtttcaattcctccaaaattattggaatttactgaacttttt
gctcaatatcatcatattgcagaaaagatttctcaaagttcaacttcacatagtgatata
gctattatttttaggaataactctagtgcagatggaattgaagcaaacttaagagaatat
ggaattccagcaaaaagaaaaggtggaatgtcattttttgattctgttgagattaaattt
gtacttgatatcttagtaatgcaactctctcacaatgatatgatggcttttattcatgtt
ttagaacatggaaaaggtattggaaaagctattgcaaaagatatttttgatgccttagta
aaattaggtcatggagatgtatttaaaggtctatttactcctgattcaagcataaataat
ccttatcaatcaaatcgtgtaaaaaatattcagctaggtctttttgatgattttatagaa
cttggaagtgtttcaaaatttaaagattgtggttttgaagaagcctttttatcaaatcct
attttaaagcatccaaaactttctgttgatggagcaaaatatttatatgacttctatctt
ctaatgaagcaaattagaagaactaaagtgcctgattctttagtatcttcagttacttca
tcaatgatgtattcaagactaaaagagtctttagctactaaaagagctacacaaaaagat
ggaaatgtaaatataattcaaaaaacaaaagctcttgctaaaataaatagaaaagtgatg
cttttaagaaatcttgcaagaaattttcaagacctttctaaatttgtaaactctatgatt
ttaggtggtggagagatgagtgaaggagaaggagtaaatcttctttcagttcatgcttca
aaaggtttagagtttaaagaagtatttgttatagaccttatggatggaagatttccaaat
agaaaacttatgagtaaaggtggaagtatcgaagaagagagaagacttttttatgtagca
gtaacaagagcaaaagatgttttataccttagttttgcaaaatatgacaagattaaaaaa
cttgattttgtttattctccatttttaaaagaagctggtcttataaaaaaagagcatcct
gaagaataa
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