Halarcobacter bivalviorum: ABIV_1193
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Entry
ABIV_1193 CDS
T06437
Name
(GenBank) DEDDh 3'-5' exonuclease domain family protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
hbv
Halarcobacter bivalviorum
Pathway
hbv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ABIV_1193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbv03400
]
ABIV_1193
DNA repair and recombination proteins [BR:
hbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ABIV_1193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AXH12194
UniProt:
A0AAX2ABS1
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All DBs
Position
complement(1223793..1224530)
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AA seq
245 aa
AA seq
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MPHYVLFDTETTGNQEEDRVIQFGAMIVDQTGKVEAYDEFCYSDVEIKLEAMEVHNITPN
LIEGKPKATETSFYKRLEELNSNENFLIAHNISFDMGMIEKEGFINNYQLIDTLRCAKHL
FPDMPYHRLQYLRYALELYKVEEAEAAKHNITIKAHDAIGDVLVMKLFLTKLVGKCREIY
PDYNPIEKLVDLTKTPVLIKSFKFGKYKNKEIAKVAQEDPGYLNWMRTNMDLDEDLRYTL
DKVLN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgccacattacgtactatttgatacagaaacaacaggaaatcaagaagaagatagagta
attcaatttggtgcaatgattgttgatcaaacaggaaaagttgaagcttatgatgaattt
tgttattctgatgttgaaattaaacttgaagctatggaagttcataatattacacctaat
ctaattgaaggaaagccaaaagctactgaaacttcattttataaaagattagaagagtta
aactcaaatgaaaattttcttatagcacataatatctcttttgatatgggaatgattgaa
aaagagggatttataaataactatcaactaattgatactttaagatgtgcaaaacatcta
tttcctgatatgccataccatagattacaatatttaagatatgctcttgaactatataaa
gttgaagaggcagaagcagctaaacataatattacaatcaaagcacatgatgctattggt
gatgtgttagtaatgaaactatttcttacaaaattagtaggaaaatgtagagagatttat
cctgattataaccctattgagaagttagtagatctaacaaaaactcctgttttaataaaa
tcttttaaatttggtaaatacaaaaataaagagattgctaaagttgcacaagaagatcca
ggttacttaaattggatgagaacaaatatggatttagacgaagatttaagatacacttta
gacaaagttttaaattaa
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