Halarcobacter bivalviorum: ABIV_1541
Help
Entry
ABIV_1541 CDS
T06437
Name
(GenBank) murein L,D-transpeptidase, YcbB/YkuD family
KO
K21470
L,D-transpeptidase YcbB
Organism
hbv
Halarcobacter bivalviorum
Brite
KEGG Orthology (KO) [BR:
hbv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hbv01002
]
ABIV_1541
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hbv01011
]
ABIV_1541
Peptidases and inhibitors [BR:
hbv01002
]
Cysteine peptidases
Family C82
ABIV_1541
Peptidoglycan biosynthesis and degradation proteins [BR:
hbv01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ABIV_1541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AXH12534
UniProt:
A0AAX2A8H1
LinkDB
All DBs
Position
1560470..1562101
Genome browser
AA seq
543 aa
AA seq
DB search
MSLKIFFLSTFLIYNLYAENKAFEIVISPKDKTILKYYYHFENKAIWIQNNNQIKDLAFD
LINKIKQDKILKPQINKLFKFEKIENLLEHRDYLTKNSLIELDILLTKTYHEYMTYLAKG
VINWQIFLDELKKIEEKDEIKAKWAKYEVRKNFITLLRKAIEKQDINLAINEVNYTFPYA
KDLENEIKRLEEISQSGGYITIPETKTILKKGNSYPQIRQIRQRLYQSNDLDSIFCESEI
ENCLEYYDQTLFNAVINFQKRYGLIADGIIGEKTIEKLNTPVEEKIKTVRINLERMRWLP
RNLGNEFILINIPAYKLKFYEDKEVQLKMDIIVGKKRFPTPIFSHRMSEIIVNPYWKIPQ
TIVKKEIIPKLVKNSDYLENENINVHENWDTNSLKFDVSNVDWNMYLDNDLIGTPKEAPM
RFIQTPGGTNPLGRIKFLFPNQYSVYLHDTPEKHYFTLNEKTLSHGCIRLERPFELFEKI
IFKEDETSFEKNKSIKNLEEKDFKLSKKIPIHIVYLTAWVENNKLQFRDDIYDYDKIQSR
LLF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaaaatattttttctttcgacttttcttatttataatctatatgctgaaaat
aaagcttttgaaatagttatatctcctaaagataaaactattttaaaatattattatcat
tttgaaaataaagctatttggattcaaaataataatcaaataaaagatttagcttttgat
ttaattaacaaaataaaacaagataaaatcttaaaaccacagataaataagctctttaaa
tttgagaaaattgaaaacttattagaacacagagactatttaactaaaaatagcctaatt
gaattagatatactcttaacaaaaacttatcatgaatatatgacttatttagctaaaggt
gttataaattggcaaatatttttagatgaattaaaaaagattgaagaaaaagatgagata
aaagctaagtgggctaaatatgaagtaagaaaaaactttattacccttctaagaaaagct
attgaaaaacaagatataaatcttgcaataaatgaagtaaattatacttttccttatgca
aaagatttagaaaatgaaataaaaagattagaagaaatctcacaaagtggcggatatata
actattcctgaaactaaaactatactaaaaaaaggtaattcttatcctcaaatcagacag
attaggcaaagattatatcaaagtaatgacttagattctatcttttgtgaaagtgaaata
gaaaactgcttagagtattatgatcagactctttttaatgctgtaattaattttcaaaaa
agatatggccttatagctgatggaataattggtgaaaaaacaatagaaaaactaaatact
cctgttgaagaaaagattaaaactgttcgaataaacctagaaagaatgagatggctacca
agaaatttaggaaatgagtttattcttataaatattcctgcatataaactaaagttttat
gaagataaagaagtacaattaaaaatggatattattgtaggtaaaaaaagatttcctact
cctatttttagtcatagaatgtctgaaataatagtaaatccttactggaaaatacctcaa
acaatagttaaaaaagagattattcctaagttagtaaaaaatagtgattatttagaaaat
gaaaatataaatgtccatgaaaattgggatactaattctttaaaatttgatgtaagtaat
gttgattggaatatgtacttagataatgacttaataggaacaccaaaagaagctccaatg
agatttattcaaacacctggaggaacaaatcctttaggaagaatcaaatttctatttcct
aaccaatattcagtatatcttcatgatactcctgaaaaacactattttacattaaatgaa
aagactttatctcatggttgtattagattagaaagaccctttgaattatttgaaaaaatt
atttttaaggaagatgaaacaagttttgaaaaaaataaaagcataaaaaatttagaagaa
aaagattttaaactatcaaaaaagatacctattcatatagtctatttaaccgcttgggtt
gaaaataacaaacttcaatttagagatgatatttatgactatgataaaatacagtcaagg
ctactgttttag
DBGET
integrated database retrieval system
