Halarcobacter bivalviorum: ABIV_1629
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Entry
ABIV_1629 CDS
T06437
Symbol
radA
Name
(GenBank) DNA repair and recombination protein
KO
K04485
DNA repair protein RadA/Sms
Organism
hbv
Halarcobacter bivalviorum
Brite
KEGG Orthology (KO) [BR:
hbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbv03400
]
ABIV_1629 (radA)
DNA repair and recombination proteins [BR:
hbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABIV_1629 (radA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_24
DUF7129
AAA_22
AAA
Rad51
AAA_14
ABC_tran
CbiA
NTPase_1
SLFN-g3_helicase
RecA
MeaB
KdpD
AAA_16
GvpD_P-loop
KTI12
AAA_30
AAA_31
nSTAND3
ATPase_2
NPHP3_N
AAA_19
AAA_5
Zeta_toxin
Zn_ribbon_8
Cyanate_lyase
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AXH12619
UniProt:
A0AAX2A888
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Position
1643298..1644647
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AA seq
449 aa
AA seq
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MAKKKTTLFECQACGEQSTKWLGKCPNCGSWDSFMELNQEQQEVLKQTFKVINTTSKATP
ITEIKQDDVVRFSSNNDEFDLVLGGGIVPGSLTLIGGSPGVGKSTLLLKVAGSIAASGKK
VLYVSGEESSGQIKLRANRLDANHKELYLLSEIKLEEIQDELLRENYEVCIIDSIQTIYS
SNLTSAPGSVSQVREITFELMRKAKDSDIAMFIIGHITKDGSIAGPRVLEHMVDTVLYFE
GESSKELRMLRGFKNRFGSTSEIGIFEMTGEGLISAKDIASKFFDKTKAQSGSALTVTME
GTRALIIEVQALVTESTYPNPKRSATGFDANRLNMLLALLEKKIDLPLNHYDVFINISGG
IKIKESSADLAVIAAIISSFRDRPVSKESVFIGEVSLTGEIKDVYSIDLRLKEAQAQGIK
KAVVAQKPNLKLDLKAFAVDEVSKMIELF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaagaaaacaacactttttgaatgtcaagcttgtggagaacaaagtacaaaa
tggctaggaaaatgtccaaactgtggttcttgggatagttttatggaattaaatcaagag
caacaagaagtacttaaacaaacctttaaagtaataaatacaacttcaaaagcgacacct
attacggaaatcaaacaagatgatgttgtaagattttcttcaaacaatgatgaatttgat
ttagttctaggaggaggaattgttcctggaagtttaactcttataggaggaagtccaggt
gttggaaaatcaactctacttttaaaagtagcaggttcaattgctgcaagtggtaaaaaa
gttttatatgtttcaggggaagagagttcaggacagataaaacttcgagctaatagatta
gatgcaaaccataaagagttatatcttcttagtgaaataaaacttgaagagattcaagat
gaacttttaagagaaaattatgaagtttgtattattgactctattcagacaatttactct
tcaaatcttacaagtgcaccaggaagtgtttctcaagtaagagagataacctttgaactt
atgagaaaagcaaaagattctgatattgccatgtttattatcggacatattacaaaagat
ggttctattgcaggaccaagagttttagaacatatggttgatactgttttatattttgag
ggtgaatctagtaaagaattgcgtatgcttagaggttttaaaaatagatttggttcaaca
tcagagattggaatctttgagatgacaggagaaggtttaatctcagcaaaagatatagcc
tcaaagttttttgataaaacaaaagctcaaagtggttcagctttaactgttaccatggaa
ggaacaagagctttaatcatagaagtacaagccttagttacagaaagcacttatccaaat
ccaaaaagaagtgctacaggttttgatgcaaatagattaaatatgcttcttgcacttctt
gaaaagaaaatcgatttacccctaaatcattatgatgtatttattaatatctcaggtggt
ataaagattaaagagagttcagctgacttagcagttattgctgcaattatctctagtttt
agagatagacctgtctcaaaagagtctgtatttattggagaagtttctttaacaggtgaa
ataaaagatgtctattcaattgatttaaggttaaaagaggcacaagcccaaggtataaaa
aaagctgtagtagcacaaaaacctaatttaaaattagatttaaaagcttttgcagttgat
gaagtttctaaaatgattgagctattttaa
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