Halarcobacter bivalviorum: ABIV_1960
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Entry
ABIV_1960 CDS
T06437
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hbv
Halarcobacter bivalviorum
Brite
KEGG Orthology (KO) [BR:
hbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbv03400
]
ABIV_1960 (phrB)
Enzymes [BR:
hbv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ABIV_1960 (phrB)
DNA repair and recombination proteins [BR:
hbv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ABIV_1960 (phrB)
Prokaryotic type
ABIV_1960 (phrB)
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AXH12937
UniProt:
A0AAX2A7E6
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Position
complement(1972029..1973372)
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AA seq
447 aa
AA seq
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MKQILWFRRDLRVSNSALLHYAKNEVLPIFIFDKNILDSLPKDDRRVTFIYDSVLKLKKS
LKTLGLDLAIFYDEPIKVFEKLKNEFDEVLCSVDFDSYAIKRDKEVEKLLPLRRFNDSFI
LNPNEHLKSDGTPYKVFTPFYKSLNLITEASSIEEYKLNENIRLSSFAYDNTPSIKELGF
EKQELPSFLYKDAKSLLEEFLLKIESYQEDRDYFYKDATSKLSAHLRFGLISAKEIFNIV
KKSNVNNYEFFIRELFWREFYNYILFHFPNSEKENFNGIKIEWNKDEEDFKKWCEGKTGV
PIIDAAMIHLNQTGLMHNRLRMIVSSFLTKNLFIDWRKGEEYFALKLLDYEASSNIGSWQ
WSSSTGADAAPYFRIFNPYTQSSKFDKEGIFIKSVIKELKDVDARLFHTENALSSNLFFD
YPKAMVDISLSRKRAIELFKKAKDESL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaattctttggtttagaagagatttaagagtttctaatagtgcattattacac
tatgcaaaaaatgaagttcttcctatttttatttttgataaaaatattttagattcttta
cctaaagatgatagaagagttacttttatttatgattcagtacttaaattaaaaaagagt
ctaaaaactttaggtttagatttagcaatattttatgatgagccaataaaggtatttgaa
aaactaaaaaatgagtttgatgaagttttatgttcagttgattttgattcatatgcaata
aaaagagataaagaagtagaaaaacttcttcctttaagaagatttaatgactcatttatt
ttaaacccaaatgaacatcttaagagtgatggaactccttataaagtatttacacccttt
tataaatcacttaatttaataactgaagcctcttcaattgaagagtataagttgaatgaa
aatataagattgtcttcttttgcttatgacaatactccttctataaaagagttaggtttt
gaaaaacaagagttaccctcttttttatataaagatgcaaaaagtttgttggaggaattt
ttgttaaaaatagaaagctatcaagaagatagagattatttttataaagatgcaacatca
aaattatcagctcatttaagatttggtcttatttctgctaaagagatttttaatattgta
aaaaaatcaaatgttaataattatgaatttttcataagagaacttttttggagagagttt
tataactatattctttttcattttccaaattctgaaaaagagaattttaatggaattaaa
atagagtggaataaagatgaagaggattttaaaaagtggtgtgaggggaaaacaggagta
ccaattatagatgcggcaatgattcatctaaatcaaacaggacttatgcataatagatta
agaatgattgtctcttcttttttaacgaaaaatctttttatagattggagaaaaggagaa
gagtattttgctttaaagcttttagattatgaggctagttcaaatattggttcttggcaa
tggagttctagtacaggagcagatgcagcaccatattttagaatttttaatccctatact
caatcttcaaagtttgataaagaaggaatttttataaaatctgtaataaaagagttaaaa
gatgttgatgcaagactatttcataccgaaaatgctttatcttcaaacttattttttgat
tatcctaaagcaatggtagatatctctttatcaagaaaaagagcaattgaactttttaaa
aaggctaaagatgaaagtttatga
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