Halarcobacter bivalviorum: ABIV_2370
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Entry
ABIV_2370 CDS
T06437
Name
(GenBank) radical SAM methylthiotransferase, MiaB/RimO family
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hbv
Halarcobacter bivalviorum
Brite
KEGG Orthology (KO) [BR:
hbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hbv03009
]
ABIV_2370
Enzymes [BR:
hbv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ABIV_2370
Ribosome biogenesis [BR:
hbv03009
]
Prokaryotic type
ribosomal protein modification factors
ABIV_2370
BRITE hierarchy
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GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
ThiI_fer
Motif
Other DBs
NCBI-ProteinID:
AXH13344
UniProt:
A0AAX2A7U9
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All DBs
Position
2379107..2380459
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AA seq
450 aa
AA seq
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MKFTETKPTKTLHLVSLGCTKNLVDSEIMLGKLKEYEITNDPTIADVIIVNTCGFIDSAK
EESINTILNLHDERKEESVLVMAGCLTQRYQEELQKELPEIDIFTGVGDYDKIDKLVNEK
RSAFTDEVFLLNETNDRVITGSSYHAYIKLSEGCNQTCSFCAIPSFKGKLHSRTLESLIK
EVKNLVSNGYKDFSFVSQDSSSYLRDLGERDGLEKLVEEVEKIEGIQSARILYLYPSTTS
LSLIEKIKNSTVFENYFDMPLQHISSNILKIMKRGKGVEKLKELMNSMKAVPNSFVRTTF
IVGHPGESQEDFEELCKFVRDYKFDRANVFSYSDEDGTAAYEMLDKVPQEIIDERANFLG
EIIKETTIQSLEQEIGNEVEVYVDGESEEHEYLLSARKVSWAPDIDGEIYINDNELLNEA
GEAKQIEFGGKYTVRITELVGDKLLATVIK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttactgaaacaaaacctacaaaaactttacatttagtaagtcttggatgtaca
aaaaacttggtagactctgagattatgctaggaaaattaaaagagtatgaaattacaaat
gacccaacaattgctgatgtaattattgtaaatacttgtggatttattgatagtgcaaaa
gaagagagtataaatacaattttaaatcttcatgatgaaagaaaagaggaatcagttctt
gtaatggctggttgtttaactcaaagatatcaagaagaacttcaaaaagagttaccagaa
attgatatttttacaggagttggagattatgacaaaatagataaacttgtaaatgaaaaa
agatctgcttttactgatgaagtatttttattaaatgagacaaatgacagagtaattact
ggttcttcttatcatgcttatatcaaattaagtgaaggatgtaatcaaacctgttcattc
tgtgcaattccaagctttaaaggtaaacttcattctagaactttagaatctttaataaaa
gaggtaaaaaatcttgtatcaaatggttataaagatttctcttttgtttctcaagactct
tcttcatatttaagagatttaggagaaagagatggtttagaaaaacttgttgaagaagtt
gaaaaaattgaaggaattcaaagtgcaagaattctttatctttatccaagtacaacttct
ctttctctaattgagaagatcaaaaactcaacagtatttgaaaactattttgatatgcct
ttacaacatatctcttcaaatattttaaaaatcatgaaaagaggaaaaggtgtagagaag
ttaaaagagcttatgaacagtatgaaagctgtgccaaactcttttgtaagaacaactttt
attgtaggacatccaggagaatctcaagaggattttgaagagttatgtaaatttgtaaga
gattataaatttgatcgtgcaaatgttttttcatattctgatgaagatggaactgctgct
tatgagatgttagataaagttcctcaagagattattgatgaaagagctaacttcttagga
gagataattaaagagactacaattcaatctttagaacaagagattggaaatgaagttgaa
gtttatgttgatggggaaagtgaagaacatgaatatctattaagtgcaagaaaagtatct
tgggcacctgatattgatggagaaatttatatcaatgataatgaactactaaatgaagct
ggagaagcaaaacagattgaatttggtgggaaatatactgtaagaatcactgaacttgtg
ggagataaacttttagcaacagttattaaataa
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