Halarcobacter bivalviorum: ABIV_2407
Help
Entry
ABIV_2407 CDS
T06437
Name
(GenBank) type I secretion system ATPase/permease, LssB family
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
hbv
Halarcobacter bivalviorum
Pathway
hbv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hbv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ABIV_2407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hbv02000
]
ABIV_2407
02044 Secretion system [BR:
hbv02044
]
ABIV_2407
Transporters [BR:
hbv02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
ABIV_2407
Secretion system [BR:
hbv02044
]
Type I secretion system
Adhesin protein transporter
ABIV_2407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_29
AAA_21
Zeta_toxin
G-alpha
DUF87
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AXH13381
UniProt:
A0AAX2ABA7
LinkDB
All DBs
Position
complement(2418665..2420812)
Genome browser
AA seq
715 aa
AA seq
DB search
MEDKTVNQNERRVDSLLENLFFLSKYYQRNSSKDSLIDGLSIFNEVMNVNNFIKASKKIG
LISKFVTREKIEDISKYTLPTVIFTNKYESMVLLDYDIENNISKVIIPELSDGEIELPFE
ELESLYVGKVIIIKPVYNFENRASKMLSITEPKKWFWGTMKRNKEFYTRIIVASIFINIF
VLALPLFIMNVYDRILPNNAIESLWALAIGVFVVMIFDFALKSIRAYYIGMASKRADIVM
SNKIFDHILNLRLDSKPASTGMFVNRLHSFEAIREFFTTATITALVDVPFVFIFVAIIFY
IGGPLGWIPVLTIILSLLFSYFMQTKTKNLVASTIKEEQLKQTSLNETVTGLEIIKSVRG
QNRMKTHFDKSLGQTAYFGEKAQLLTQVASNFTDFLSKFSNVAIIVFGVYIATSGDMTMG
AIVAAMMLNRRAVAPASKIVTLVIKYDRTVVALKNLDEIMQMDVEKENKVYLSRPELKGD
IEFKDVSFSYKNHNYEVLKSINLKIKQGEKVAILGKIGSGKSTLIKLIQNLYVPTKGSVL
IDNTDVRQIDPVDLRKAIGVVPQEPFLFMGSVKDNITIGDPFATDEEILNASKISGVHDF
LGKHESGYDFIVGERGEGLSGGERQAITLARALVGNPHFMILDEPTNSMDKQTEKAFIKR
LNSILSNQTVIVVTHKFSLLSIVDRVIVLDDGKIIADGPKDKVFGNNKAVKSQDE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
ttggaagataaaacagtcaatcaaaatgaaagaagagtagactctttattagagaatctt
ttctttttatctaaatattatcaacgaaatagttctaaagactcattaatagatggctta
tctatctttaatgaggttatgaatgtaaataattttataaaagcttcaaaaaagattggg
cttattagtaaatttgttactagagaaaaaatagaagatatctctaaatatactttacca
acagtaatatttacaaacaaatatgaatcaatggttcttttagattatgatattgaaaat
aatatttcaaaagtaattattcctgaattgagtgatggagagatagaacttccttttgaa
gagcttgaaagtttatatgttggaaaagtaattattataaaaccagtttataactttgag
aatcgtgcttcaaaaatgctttctattacagaacctaaaaaatggttctggggaacaatg
aaaagaaataaagagttttatacaagaattattgttgcttctatattcattaatatcttt
gtattggctttacctttatttataatgaatgtatatgacagaattttacctaataatgca
attgaatcactttgggctttagcaataggtgtttttgtagtgatgatttttgattttgca
ttaaaatcaattagagcatattatataggtatggcatcaaaaagagcagatattgtaatg
tctaataaaatttttgatcatatcttaaatttaagattagactcaaaacctgcatctaca
ggtatgtttgtaaatagattacattcttttgaagccattagagaattttttactacagca
acaattacagctttagtagatgttccttttgtttttatatttgtagcaataattttttat
ataggtggaccgttaggttggattcctgtacttacaattattctatctttacttttttca
tattttatgcaaacaaaaacaaaaaatcttgttgcaagtactattaaagaagaacaactt
aagcaaacatctttaaatgaaacagtaacaggattagagattataaaaagtgttcgtggt
caaaatagaatgaaaactcattttgataaatcgttaggtcaaactgcatattttggagaa
aaagcacagcttttaactcaagttgcaagtaactttacagactttttatcaaagttttct
aatgttgcaattattgtttttggtgtatatatagcaacatcaggagatatgacaatggga
gctatagtagctgctatgatgttaaatagaagagctgtagctcctgcatcaaaaatagtt
actttggtaatcaaatatgatagaacagttgttgcattaaagaatcttgatgaaataatg
caaatggatgtagaaaaagagaataaagtatatttaagtagacctgaattaaaaggtgat
atagaatttaaagatgtatctttttcttataaaaatcataattatgaagtattaaaaagt
ataaatttaaaaattaagcaaggtgaaaaagtagcaattttaggaaaaattggttctgga
aaatctacacttattaaacttattcaaaatctatatgtgcctacaaaaggatcagttcta
attgataatacagatgtaagacaaattgatccagttgatttaagaaaagcaattggtgtt
gttcctcaagagccatttttatttatgggaagtgttaaagataatataacaattggagat
ccttttgcaacagatgaagagattttaaatgcttcaaaaattagtggtgttcatgatttt
ttaggaaagcacgaatcaggatatgactttattgttggtgaaagaggtgaaggtttaagt
ggaggagaaagacaagctattactttagctagagctttagttggaaatccacactttatg
attttagatgagccaacaaactcaatggataaacaaactgaaaaagcttttataaaaaga
ttgaatagtattttgtcaaatcaaacagtaattgtagtaacacataaattctcattactt
tcaattgttgatagagtaatagttttagatgatggaaaaattattgcagatggaccaaaa
gataaagtttttggaaataataaagctgtaaagagtcaagatgaatag
DBGET
integrated database retrieval system
