Helicobacter pylori PeCan18: HPPC18_01115
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Entry
HPPC18_01115 CDS
T02036
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hca
Helicobacter pylori PeCan18
Brite
KEGG Orthology (KO) [BR:
hca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hca03400
]
HPPC18_01115
DNA repair and recombination proteins [BR:
hca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPPC18_01115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
DnaB_C
ChlI
Lon_C
nSTAND_NTPase5
AAA_24
Rad51
NTPase_1
AAA_14
RecA_N
AAA_16
ABC_tran
NACHT
ATPase_2
SLFN-g3_helicase
AAA_31
nSTAND3
AAA_22
CbiA
DAP3
ArsA_ATPase
GvpD_P-loop
NPHP3_N
AAA_5
Zeta_toxin
DUF7129
SRP54
AAA
MeaB
RsgA_GTPase
zf-C2H2_7th_ZNF462
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AFI02014
LinkDB
All DBs
Position
227222..228568
Genome browser
AA seq
448 aa
AA seq
DB search
MAKKTSLFECQHCGFTSPKWLGKCVQCNAWESFIELNQTQKEVLHALKKPLPQAQKSVSI
AEIEHEEVIKFSSTQSELDIVLGGGIAKGGLYLVGGSPGVGKSTLLLKVASGLAKNQQKV
LYVSGEESLSQIKMRATRLDCIEKELYLLNEINWPVIKSNMESENYFACVIDSIQTLYSP
EISSAPGSISQVREITFELMRLAKTRNIAVFIIGHITKEGSIAGPRVLEHMVDSVLYFEG
DPSRELRILRSFKNRFGPTSEIGLFEMKEQGLVSAKEASSLFFSQEEPMEGSAITITLEG
SRALILEIQALVSECSFGAPKRLANGFDTNRLNMLIALLEKKLEIPLNRHDVFINVSGGI
KISEPACDLAVIASILSSFKNRKIDNKTAFLGEVSLNGRILEAPNLNARLKEMENYGFLK
AILPKKPSQKTSIKCYEANVVGKIVEWM
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaaaaaacttctttatttgagtgtcagcattgtggttttacaagccctaagtgg
ctaggaaagtgcgttcaatgcaacgcatgggagagttttatagaattgaaccaaacccaa
aaggaagttttacacgcgcttaaaaaaccgctcccacaagcgcaaaaaagcgtttctatc
gctgaaattgaacatgaagaagtcatcaagttttcttccactcaaagcgagttggatatt
gttttaggtggggggatcgctaaaggagggctgtatttggtgggggggagtcctggggtg
gggaaatccactctgcttttaaaagtggcttctggcttagccaaaaaccagcaaaaggtt
ttgtacgtgagcggggaagagagcttgagccagattaaaatgcgcgccactagattagat
tgcatagaaaaagaattgtatctgcttaatgaaatcaattggcctgtgattaaatctaat
atggaaagtgaaaattattttgcttgcgtgattgattccattcaaacgctttattcgcca
gagatttcttcagcgcccggctctatttcgcaagtgcgagagatcacttttgagctcatg
cgtttagctaaaacaagaaatattgctgtttttatcatcggtcatatcactaaagaaggg
agcatcgcagggcctagagtgttagagcatatggtggatagcgtgctgtattttgaaggc
gatcccagtagggaattaaggattttaaggagttttaaaaaccgctttggccctacgagt
gaaatcggcttgtttgaaatgaaagagcagggtttggtgagcgctaaagaagcttcaagc
ttgtttttttctcaagaagagcctatggaggggagcgcgatcaccatcactttagaaggc
tcaagggcgttgattttagaaatccaggcgttggtgagcgaatgcagtttcggggcgccc
aaacgattggcgaacgggtttgatactaaccgccttaacatgctcatcgctttattagaa
aaaaagctagaaatccccttaaaccgccatgatgtgttcattaatgtgagcggaggcatt
aagattagcgagccggcttgcgatttagcggtcattgccagtatcctttcaagctttaaa
aacagaaaaattgacaataaaacggcgtttttgggtgaagtgagtttgaatggcaggatt
ttagaagcccctaatttgaacgccagattgaaagaaatggaaaattatggctttttaaaa
gccattttgcccaaaaaacccagtcaaaaaacctctatcaaatgctatgaagccaatgtg
gtgggtaagattgttgagtggatgtga
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