Helicobacter pylori PeCan18: HPPC18_01240
Help
Entry
HPPC18_01240 CDS
T02036
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hca
Helicobacter pylori PeCan18
Pathway
hca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPPC18_01240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hca03019
]
HPPC18_01240
03009 Ribosome biogenesis [BR:
hca03009
]
HPPC18_01240
Enzymes [BR:
hca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPPC18_01240
Messenger RNA biogenesis [BR:
hca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPPC18_01240
Ribosome biogenesis [BR:
hca03009
]
Prokaryotic type
rRNA helicases
HPPC18_01240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
P-loop_SecA
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
AFI02038
LinkDB
All DBs
Position
251595..253073
Genome browser
AA seq
492 aa
AA seq
DB search
MEFNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV
IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVC
VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD
DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN
EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRFSI
MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL
VTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDAKVSEGIISLYEQLTEIFEPS
QLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPSNKKTHQHDQVRSFKKGHYRDKHP
KTNRYSKKPKRR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaatcaaccaccactccctacagaaattgatgatgacgcttatcataagccg
agttttaatgatttgggcttaaaagaatcggttttaaaatccgtttatgaagccggtttc
acttccccaagccccattcaagaaaaggccattccggctgttttgcaaggccgagatgtc
atcgcacaagcccaaacaggcacaggaaaaaccgccgctttcgctctgcccattatcaac
aaccttaaaaacaaccacaccatagaggccttagtgatcacgcccactagagaattagcc
atgcaaattagcgatgagattttcaaattgggcaaacacaccaggactaaaaccgtgtgc
gtgtatggaggccagagcgttaaaaaacaatgcgaatttattaagaaaaacccccaagtg
atgatcgccacgccaggaaggctgttggatcatttaaaaaacgagcgcatccataagttt
gtgcctaaagtggtcgtgttagatgaaagcgatgaaatgctagatatggggtttttagac
gacattgaagagatttttgactacctccctagcgaagcgcagattttgcttttttcagcc
acgatgccagagccgatcaaaaggctagcggataagattttagaaaaccctattaaaatc
catattgccccctctaatatcactaacactgacatcacccaacgcttttatgtgatcaat
gagcatgagagggccgaagcgatcatgcgccttttagacacccaagcgcccaaaaagagc
atcgttttcacgcgcaccaaaaaagaggccgatgaattgcaccaattccttgcttctaaa
aattacaaaagcaccgccttgcatggggatatggatcaaagggatcgccgcttttctatc
atggcgtttaaaaaaaatgacgctgacgtgttggtggctacggatgtggcgagtcgtggg
ctagacattagcggtgtaagccatgtgtttaactaccatttgcccctaaacactgagagc
tatatccatcgcattgggagaaccgggcgagcgggcaaaaaaggcatggcgatcacttta
gtaacccctttagaatacaaagagcttttacgcatgcaaaaagaaattgattcagagatt
gaactttttgaaatccccaccattaacgaaaatcagatcatcaaaaccttgcatgacgct
aaagtgtctgaagggatcatcagcctttatgaacagcttaccgaaatttttgagccgtct
caattggttttaaaacttttgagtttgcagtttgaaaccagtaaaattggcttgaaccag
caagagattgatgcgattcaaaaccctaaagaaaaaacgccaaaaccctctaacaaaaaa
acgcaccaacatgatcaagtgcgttctttcaaaaagggccactacagagacaaacacccc
aaaacgaatcgttattctaaaaaacccaaacgccgttaa
DBGET
integrated database retrieval system
