KEGG   Helicobacter pylori PeCan18: HPPC18_02515
Entry
HPPC18_02515      CDS       T02036                                 
Name
(GenBank) cag island protein, DNA transfer protein
  KO
K03196  type IV secretion system protein VirB11 [EC:7.4.2.8]
Organism
hca  Helicobacter pylori PeCan18
Pathway
hca03070  Bacterial secretion system
Module
hca_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hca00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPPC18_02515
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hca02044]
    HPPC18_02515
Enzymes [BR:hca01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HPPC18_02515
Secretion system [BR:hca02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   HPPC18_02515
SSDB
Motif
Pfam: T2SSE DEAD nSTAND3 AAA_7 ResIII ABC_tran AAA_19 ATP_bind_1 FtsK_SpoIIIE Mg_chelatase AAA_22 Pox_A32 DUF87 TrwB_AAD_bind Septin ATPase AAA_16 GARS_A Viral_helicase1 NACHT TsaE AAA_29 AAA_33
Other DBs
NCBI-ProteinID: AFI02276
LinkDB
Position
complement(516607..517599)
AA seq 330 aa
MTEDRLSAEDKKFLEVERALKEAALNPLRHATEELFGDFLKMENITEICYNGDKVVWVLK
NNGEWQPFDVRNKKAFSLSRLMHFARCCASFKKKTIDNYENPILSSNLANGERVQIVLSP
VTVNDETISISIRIPSKTTYPHSFFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGT
GSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMR
PDRIILGELRSSEAYDFYNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNSAARNIKFE
SLIEGFKDLIDIIVHINHHKQCDEFYIKHR
NT seq 993 nt   +upstreamnt  +downstreamnt
atgactgaagacagattgagtgcagaagataaaaaatttctagaagtagaaagagcctta
aaagaagcggcattaaatcctctaaggcatgctactgaagaactctttggtgatttttta
aaaatggaaaatatcactgagatttgttacaatggggacaaggttgtatgggttttaaaa
aataatggcgaatggcaaccgtttgatgtgagaaacaagaaagcctttagcttatctcgt
ttaatgcatttcgctcgatgttgtgcaagttttaagaaaaaaacaatagacaactatgaa
aatcctattttgagtagcaatttagcgaatggtgaaagggtgcagattgtcctttcccct
gttacagttaatgatgaaaccatttccatatccataaggatacctagcaaaacaacctat
cctcatagcttttttgaagaacaaggtttttataatctactagacaacaaagaacaagcg
atcagtgcgattaaagatggtattgctattggcaagaatgtgattgtttgtggtggcaca
ggaagcggtaaaacgacttatatcaaaagcatcatggagtttatccccaaagaagaaagg
atcatatccattgaagacaccgaagagatcgtattcaaacaccacaagaactacacacag
cttttttttggtgggaatatcacctctgctgattgcttaaagtcatgtttgagaatgcgg
cctgatagaatcattttaggggaactcagaagcagtgaggcatacgatttttataatgtg
ctttgtagcggccataaaggcacgctaaccactctacatgcagggagcagtgaagaagcg
tttattcgtttagctaacatgagttcatctaatagcgcagcaaggaatatcaagtttgaa
agtctcattgaaggctttaaagatttgattgatataatcgttcatatcaaccaccacaaa
cagtgtgatgagttttatatcaaacataggtag

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