KEGG   Helicobacter pylori PeCan18: HPPC18_02535
Entry
HPPC18_02535      CDS       T02036                                 
Name
(GenBank) cag pathogenicity island protein W
  KO
K12094  cag pathogenicity island protein 9
Organism
hca  Helicobacter pylori PeCan18
Module
hca_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hca02044]
    HPPC18_02535
Secretion system [BR:hca02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HPPC18_02535
SSDB
Other DBs
NCBI-ProteinID: AFI02280
LinkDB
Position
complement(525274..526881)
AA seq 535 aa
MFNLKRTFLITIMSFFLIVPNWLKAIDLPIVSNLKIYQTVYCMLIPSYVLTNKSFADILT
GYTSIGQSGSGKSSGQGVIEALSTPLATSLAASNLVKYLNTLGPLWGSAWASVATAIQGF
ALTPSSGCNFGWNALINKNIDVSMDSVLDNLSNKIQNFTKGGVEDNVKGNILLQIIGSIT
AQASTNITADGLIWLIGKEFTANKLQNNTTAMLAFAALESVVKGADAAVLPAYGVVNLPD
IIIGQGSYLDFVSYLIYIVFGIFVFISFMKLRDISNGIQINIGFEYMRFIGGTLFKMAMV
SFIAYAGFGYLYKISYSIYFGLAGAFGLNQVLFWALDLVLNYTVNSILPAVRAVFSNVGN
NAPSLLQGLQVAGISLFAIFMQVTIIMRISTVVVKPLIAGAFSGIVFPIAVCLIVLDWFK
DSMKNILIWFINNLFILVLAIPILLFGVLALLAFNLTITPSVAIQNINQGGLGIDSTIAS
LITLFILKGFIETIIESVNAIVNTIFSSVSMDGSRMDRERDALMVGRVGGSMFKG
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgtttaatcttaaaaggacttttttaataacgatcatgagtttttttctcattgttcct
aattggttgaaagctattgatttgcccattgtttcaaatctcaaaatttaccaaacagtt
tattgcatgctgataccgagttatgttttaaccaacaagagttttgcagatattttgaca
ggctatacatctattggccaatcagggagtggaaagagttcagggcagggtgtgattgaa
gcacttagtacaccattagccacaagtttagccgctagcaatctggtgaaatatttgaac
actttaggtcctttatggggatcggcgtgggcaagtgttgctacagctatacaaggcttt
gctctaacgccatcaagtggctgtaattttggttggaacgcattgataaataaaaacata
gatgtatctatggatagcgtgctagacaatttgagcaacaagattcaaaatttcaccaaa
ggcggtgttgaggacaatgtgaaaggtaatattcttttgcaaataattggctcaataacc
gctcaagcttctacgaatattacagctgatggtttaatttggctgattggtaaagaattc
actgcaaataaactgcaaaacaacactacagccatgcttgcttttgccgcactagaatct
gttgtcaaaggagcggacgctgctgttcttcctgcatatggtgtagtcaatctgcctgat
attatcatagggcaagggtcatatcttgattttgtttcttacctaatttatattgttttt
gggatttttgttttcatttcttttatgaaattgagggatatttcaaatggtattcagatt
aacataggttttgaatacatgcgatttattggggggacattattcaaaatggcgatggtc
tcttttatcgcctatgcaggttttggttatctttataaaatctcttattccatttatttt
ggtttagcaggcgcttttgggctgaatcaagttcttttttgggctttagatttagtgctg
aattacactgttaattcaattttacctgcggtaagagctgttttttctaatgttggcaac
aacgctcctagtttgttacaaggcttgcaggtggcaggtatttctttattcgccattttt
atgcaagtaactattattatgagaataagcactgtggttgtgaaacctttgatagctggg
gcttttagcggtattgtgttccctattgcggtatgtttgatcgtgctagattggttcaaa
gattccatgaaaaacatattgatatggtttatcaataatttgtttatcttggttctagct
atccctattttactctttggtgttttggcattattggcattcaatttgaccataacgccc
tctgttgctatacaaaacatcaatcaagggggactgggcatcgattcaactattgcgagt
ttgatcactctatttattttaaaaggtttcatagagacgattattgagagtgtcaatgcg
atcgttaataccattttcagctctgtctctatggatggcagcaggatggatagagaaaga
gatgccttaatggtaggaagagttggtggatctatgttcaaaggataa

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