Helicobacter pylori PeCan18: HPPC18_02715
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Entry
HPPC18_02715 CDS
T02036
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hca
Helicobacter pylori PeCan18
Pathway
hca00300
Lysine biosynthesis
hca00470
D-Amino acid metabolism
hca01100
Metabolic pathways
hca01110
Biosynthesis of secondary metabolites
hca01120
Microbial metabolism in diverse environments
hca01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hca00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPPC18_02715 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPPC18_02715 (dapF)
Enzymes [BR:
hca01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HPPC18_02715 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AFI02316
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All DBs
Position
complement(560856..561677)
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AA seq
273 aa
AA seq
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MVFYKYSGSGNDFLIAQSFKKKDFSNLAQQVCHRHEGFGADGLVVVLPSKDYDYEWDFYN
SDGSKAGMCGNASRCVGLFAYQHNIAPKEHVFLAGKREISIRIEEPNIIESNLGNYEILD
TIPNLRCKKFFTNDSVLENIPMFYLINTGVPHLVGFVKNKEWLNSLNTLELRALRHAFNA
NINIAFIENKETIFLQTYERGVEDFTLACGTGMAAVFIAAHLFHNTPKKATLIPKSNEFL
ELSLKNDEIFYKGVARYIGMSVLGMGVFDHYFL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggtgttttacaaatattcagggagcgggaatgattttttaatcgctcaaagcttcaaa
aaaaaagatttttccaatttagcccaacaggtgtgccataggcatgagggttttggggct
gatgggcttgtagtcgtcttaccgagtaaggattatgactacgaatgggatttttacaat
tcagacggctctaaagcgggcatgtgtgggaatgcgagccgttgcgtggggttatttgcc
taccagcataatatagcccctaaagagcatgtttttttagccggaaaaagagagatttct
atccgcatagaagagcccaatatcattgaaagcaatctcggtaactacgaaatcttagac
accatacccaatttaagatgcaaaaaattttttaccaacgatagcgttttagaaaatatc
cctatgttctatctcatcaatacaggagtgccgcatttagtggggtttgtgaaaaataaa
gagtggttaaattcccttaacacgctggaattaagggctttaaggcatgcgtttaacgct
aatattaacatcgcttttatagaaaataaagagacgatttttttacaaacttatgaaaga
ggggttgaagatttcacgctagcttgcgggacaggcatggcagcggtttttatcgccgcg
cacctttttcataacacccctaaaaaagccactctcatccctaaaagcaacgaattttta
gagctttctttaaaaaatgatgaaattttttataaaggagtcgcgcgttatattggcatg
agcgttttaggcatgggtgtttttgatcattatttcttataa
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