Helicobacter pylori PeCan18: HPPC18_03510
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Entry
HPPC18_03510 CDS
T02036
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hca
Helicobacter pylori PeCan18
Pathway
hca03030
DNA replication
hca03430
Mismatch repair
hca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPPC18_03510
03430 Mismatch repair
HPPC18_03510
03440 Homologous recombination
HPPC18_03510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hca03032
]
HPPC18_03510
03400 DNA repair and recombination proteins [BR:
hca03400
]
HPPC18_03510
Enzymes [BR:
hca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPPC18_03510
DNA replication proteins [BR:
hca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPPC18_03510
DNA repair and recombination proteins [BR:
hca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPPC18_03510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
EH_Signature
RCF1-5-like_lid
AAA_5
AAA_14
DNA_pol3_gamma3
AAA_assoc_2
AAA_30
DEAD
AAA_lid_RFC1
AAA_19
TIP49
Motif
Other DBs
NCBI-ProteinID:
AFI02459
LinkDB
All DBs
Position
complement(736881..738629)
Genome browser
AA seq
582 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCETGPKAVPCDTCIQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYESSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEARLQERYAILENYETEGVLEEMMLFLKAKLLSPDTYSILLI
ERFFKIIMSSLSLLKEGANASFVLLLLKMKFKEALKLKALDDAIVELEQAPFNQSPSISY
NAPKQEPKSTERIEGTEKRENTETPQTPMLSAKDRIFHNLFKRVQMLVYERNYELGVVFE
KNIRFIDFDSQTKTLTWESLATDKDKELLRERFKIVKSIIDGVFGKGENIKIALKHHLEN
KSAPEETKEVKDFKISSLREKILPKPTTETTAEMQENEKEAVGKALQIKENNTKEVQENE
TKETKEAQPKEAPTALQEFMTNHSELIEEIKSEFEIKSVELL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaaggggttcgggtaaaaccagctcttctaggatttttgctagggcttta
atgtgcgaaacagggccaaaggctgtgccttgcgatacttgcatccaatgccagagcgct
ttaaacaaccatcatatagatattatagaaatggatggggcgtctaatagggggattgat
gatgtccgtaacctcatagagcaaacgcgctacaaaccaagctttgggcgttataaaatc
tttatcattgatgaagtgcacatgttcaccactgaagcgtttaacgcgcttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacggatgccttgaaattg
cccgctaccatactcagtcgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaagtgagctatgaaagtagcgcg
ttagaaaaactcgctcacagcgggcaagggagcttgagggacacgatcactcttttagag
caagccatcaattattgcgataacgctatcacagaaagcaaggtggctgaaatgttaggg
gcgattgaccgaagcgttttagaagatttttttcaaagcctaatcaaccaagatgaagcg
cgattgcaagagcgttatgccattttagaaaattatgaaaccgagggcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgatacttattccattcttttgata
gagcgcttttttaaaatcattatgagcagtctcagccttttaaaagaaggggcaaatgct
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaactcaaagcccta
gacgatgcgattgtagaattagagcaagcccctttcaatcaaagccctagcataagctat
aacgcccctaaacaagaacccaaaagcacagaaagaatagagggaacagaaaaaagagag
aacacagaaaccccacaaactcccatgctttcagctaaagatcgcatttttcacaacctc
ttcaaacgagtccaaatgttggtttatgagcgcaattacgaattaggggtggtgtttgaa
aaaaatatccgtttcattgattttgacagccagactaaaaccttgacttgggagtcttta
gctactgataaagataaagagcttttaagagagcgttttaaaatcgtgaaaagcatcatt
gatggggtttttggcaagggcgaaaatatcaaaatcgctttaaaacatcatttggaaaat
aaaagcgctccagaagaaactaaagaggttaaagattttaaaatctcttctttaagggaa
aaaatcttacccaaaccaaccaccgaaaccacggctgaaatgcaagaaaatgaaaaagaa
gcggttggaaaagcgcttcaaataaaagaaaacaacactaaagaggttcaagaaaacgaa
actaaagagactaaagaagcccaacccaaagaagccccaacagcgttgcaagaatttatg
actaaccactctgagctgattgaagaaattaagagcgagtttgaaatcaaaagcgtggaa
ttgttatga
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