Helicobacter pylori PeCan18: HPPC18_04960
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Entry
HPPC18_04960 CDS
T02036
Name
(GenBank) VirD4 coupling protein
Organism
hca
Helicobacter pylori PeCan18
Pathway
hca03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hca00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HPPC18_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
ARM_At3g06530
Motif
Other DBs
NCBI-ProteinID:
AFI02730
UniProt:
I0EIG1
LinkDB
All DBs
Position
complement(1046402..1048645)
Genome browser
AA seq
747 aa
AA seq
DB search
MKMQFVKAFCVLFSILLIPLFFILANYYTFDALKSLRQAYFFSQSVFVGLYHGASIFDLK
FEVYLTMLISLMPFVATIYINFPKTTETSHGYARWANVKDIECFKIFSKEGFCKVVHRLG
VQFDNGFILGKFGFPKLRNVCYDKPLGAMIVAPPGAGKTACVALPNLLTLPNSCIITDIK
GELRDKTAGYRQKFLNNRILIFNPYGDDNTCYFNPFDKRIVEKMTFAEQLRHVKAVGDGI
FVDEEDHWVSKAKELFVFFALLQVVTKGHSSFYDVSIAPANDYAPLIHPKSPYYKQLYQH
DKKTGEVILDPQTNAPMKNPQSNVLKLFLNQVADQKYIDMNDEKNYDLREPEPPYGTKGA
LDEIIRTDARSWANTPDDEFGSIMSSFKRFMYVYKDPKVREATSKMSFDYEELRTGNISI
YIVIAQIDIGTLSSLVRAFLESIAKNLMVKESSKPEERIFIIADEFVRFGKLPFLLEMPA
LCRSYNVVPLFITQDYAMIRKYYSDDDLKILKGVVHYNIVFKMNSAEDAEIVSKEVGEFT
RQSKNYSTEKGQLVFGGSSSYSHEGRNLLTAQDIMNINSDEVIVIVTGAKATPLKLKANY
WFKDKELLKRANLPIDLEVERQRVEEPIQPTTEIETTPNQNKADLEPSNKGEKVENESNE
RNTNENNPTTPQELENSNLKESEKDSESPITLENANENIEQGNHNEIDEILKKPLSEISM
EEKRALFKKMQQGNEESEQEVTQSTQS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcaatttgtgaaggctttttgcgtgctttttagcattttacttatcccctta
ttttttatcttggcaaattattacacttttgatgccttaaagtcgttgagacaggcttat
ttcttttctcaaagcgtgtttgtagggctttatcatggggcaagcatctttgatttaaaa
tttgaagtctatcttactatgctaatctctttaatgccctttgtggctacgatttatatc
aatttcccaaaaaccacagaaacttcgcatggctatgcgagatgggctaatgttaaagat
atagaatgctttaaaatttttagcaaagagggcttttgtaaagtggtgcatagattaggg
gtgcaatttgataatggctttattctaggtaaatttggttttccaaagcttagaaatgtg
tgctatgacaagcccttaggagcgatgattgttgcaccccctggtgctggaaaaactgca
tgtgtggctttgccaaatttattgactttgcctaatagctgtattatcactgatattaaa
ggcgaactaagagataagaccgcaggttatagacaaaaattcttaaacaatagaatttta
atttttaatccttatggtgatgataacacttgctatttcaatccttttgataaaaggatt
gttgaaaagatgacctttgcggagcaattaaggcatgttaaagcagtaggcgatggtatt
tttgtagatgaagaagaccattgggtatctaaagctaaagagctttttgtcttttttgct
cttttacaagtagtaaccaaagggcatagctctttttatgatgtctctatcgcaccagct
aatgattatgcccccttaatacaccctaaaagcccttattacaagcaactttaccaacac
gataaaaagacaggcgaagttatcttagacccacaaactaacgcccccatgaaaaatccc
caatctaatgttttaaaactctttttaaatcaagtggctgaccaaaaatacatagatatg
aatgatgaaaaaaactatgacctaagagaacctgaacccccttatggaacaaaaggggcg
ttagatgagattataaggacagatgctaggagttgggcaaacactcctgatgatgaattt
gggagcattatgtcttcttttaagcgttttatgtatgtctataaagacccaaaagtgcgt
gaagctacttctaaaatgagctttgattatgaagaattaagaacgggcaatatcagtatt
tacattgtaatcgctcaaattgatataggcacactttcttctttagtaagagccttttta
gagagtattgctaaaaaccttatggtcaaagaaagctctaaacctgaagagcgtattttt
atcattgctgatgaatttgttagatttggtaagttgcctttcttgttagaaatgccagca
ctttgtcgctcttataatgttgtccccttattcatcacgcaagattatgcgatgattaga
aaatactatagcgatgatgatttgaaaatcttaaaaggcgtggtgcattataacattgtc
tttaagatgaatagtgctgaagatgctgagattgtctctaaggaagtgggcgaatttaca
agacaatctaaaaattattctaccgaaaaaggtcaattggtctttggaggtagctcttct
tatagccatgagggtagaaacttactcacagcccaagatattatgaatatcaattcagat
gaagtcattgttattgttacaggggctaaagctacccccttaaaactcaaagctaattat
tggttcaaagataaagagcttttaaaaagagctaatttgcctattgatttagaagtagag
agacaaagagttgaagagcctatacaacccactacagagattgaaacaacccctaatcaa
aacaaagctgacttagaaccaagtaataagggggaaaaagtagagaatgagagcaatgag
agaaacactaacgagaataatcccactacaccacaagagcttgaaaattcaaacttaaaa
gaaagcgagaaagacagtgaaagtcccattaccttagaaaatgctaatgaaaatatagag
caaggaaatcacaatgaaattgatgagattttaaaaaagccactgagtgaaatcagtatg
gaagagaaaagagccttatttaagaaaatgcaacaaggcaatgaagaaagcgaacaagaa
gttacacaaagcacccaaagttaa
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