KEGG   Helicobacter pylori PeCan18: HPPC18_05010
Entry
HPPC18_05010      CDS       T02036                                 
Name
(GenBank) VirB4 type IV secretion ATPase
  KO
K12053  ComB4 competence protein
Organism
hca  Helicobacter pylori PeCan18
Brite
KEGG Orthology (KO) [BR:hca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hca02044]
    HPPC18_05010
Secretion system [BR:hca02044]
 Type IV secretion system
  DNA uptake competence system protein
   HPPC18_05010
SSDB
Motif
Pfam: CagE_TrbE_VirB TrwB_AAD_bind FtsK_SpoIIIE DUF87 TraG-D_C AAA_22 Zot AAA_29 PduV-EutP SAM_DrpA RsgA_GTPase MMR_HSR1 AAA_7 AAA_16 ABC_tran Sporozoite_P67 AAA_25 RNA_helicase
Other DBs
NCBI-ProteinID: AFI02740
UniProt: I0EIH1
LinkDB
Position
complement(1057721..1060297)
AA seq 858 aa
MLESALKYCKEKAIDLLAGFVPKTYSMAQECNILGLYDDTFIITKQENLVGIISLQGLSY
SNLMQKDLEGYFDTRQNVLNNISKDIQLRIVAKRRKEFINQSPNIDNIYAKAIITQFESK
EIYKTEYFLVFETITSNVKSFFEKKKLEMTTSINEELEESSKEDKQENENSSNETHSNTS
SKKDKKNKFKKKITFSTTSKRALLIQTIERVKNALKEFKPTLLNSKEVLNFYAEYINGKY
IAFNPKLKRLSDSYIASNVHFKKDYFVIEFQNQNTFCACVGIKAYESEEISSLPISTLLH
TQIELDLIFHIRSLGQFESLNFLKTKKKLTLSKIVKADIDNYIELVQANRLSMQECALNL
VIRAKSKAKLDKSLKEILSLLNNAGLGSVTETIGLKPSYFSFFPNNANINPRMRHQTSQV
IASLILFEKNNTGFRANSWGDMPLSVFKNLDHSPYLFNFHNQEVKHKGVLAHNVARVVGH
TMIIGATGAGKTTLISYLMMSALKYSNIDILALDRLNGLYSFTKYFDGIYNQGENFHINP
FSLEDSATNRAFLLHFYAQMAKVDSYDDHKDKVEDRTALLNAIDTMYRNYNDEVKQAKFS
NQELPLPFDLKEFVNAIVKTNTDILDSSFEDYLKSSLFSSRMDSLDFKTRISTINTDSIL
HNDDDAGLLAYYVFHKMIDRALKINRGFLCFIDEFKSYAQNEMMNKKINEIITQARKANG
VIVLALQDINQLSEVRNAQSFIKNMGQLILYPQRNIDTKDLNDKFGIRLSDTEKHFLENT
AVNEYKVLLKNMNDGSSNIIDVSLSSLGNYLQIFSSNSSMVEHIDNLIKHYPKTWREVFV
SNKHENFDDKKHLEKVLK
NT seq 2577 nt   +upstreamnt  +downstreamnt
atgttagaaagcgcccttaaatattgcaaggaaaaagccatagaccttttagcagggttt
gtgccaaaaacctattctatggcacaggagtgcaatattttaggcttgtatgatgatact
ttcattattaccaaacaagaaaatctagtaggcattatatccttacaaggactaagctat
tctaatttaatgcaaaaagacttagagggctattttgatactagacaaaatgttctcaac
aacattagtaaagacattcaattaagaattgtggctaaaaggcgtaaggaatttatcaat
caaagtccaaatattgacaatatttatgccaaagctattatcacacaatttgaaagcaag
gaaatctataaaacagagtattttttagtgtttgaaactatcacttctaatgtcaagtct
ttctttgaaaaaaagaaattggaaatgactacttcaattaatgaagagttagaagaaagc
tctaaagaagataaacaagagaatgaaaatagctccaatgaaactcattcaaacacaagc
tctaaaaaagacaagaaaaacaagttcaaaaaaaagataacctttagcaccacaagtaaa
agagccttactcattcaaaccatagaaagagtaaaaaacgctcttaaagaatttaaacct
actttactaaattctaaagaagtattaaatttctacgcagaatacatcaatggcaaatac
atcgcctttaatcctaaattaaagcgattaagcgatagctatattgcatctaatgtgcat
tttaagaaagattactttgtcattgaatttcaaaatcaaaacaccttttgtgcgtgtgtg
gggattaaggcttatgagagcgaagaaatttcttcgctccctatatctactcttttacac
acccaaattgaactagatttaatctttcatatccgctctttagggcaatttgaaagcctg
aattttttaaaaactaagaaaaagctcacgctttctaaaatagtaaaagctgatattgat
aattatatagaattagtgcaagccaatcgtttgagcatgcaagagtgtgctttaaactta
gttataagggctaaaagtaaagctaaattagacaagtctttaaaagagattttatccttg
cttaataatgctggactaggcagtgttacagaaactatagggctaaaaccatcttatttt
tcattcttcccaaataacgccaatatcaaccctagaatgagacatcaaacttcccaagtc
atagcatctttgattttgtttgagaaaaataatacaggttttagagcaaattcttggggg
gatatgcccttatctgtgtttaagaacctagaccatagcccttatttgtttaattttcat
aatcaagaagtcaaacataagggcgtgttagcccacaatgtcgcacgagtagtgggacat
accatgattataggagcaacaggtgctggtaaaaccacactcattagctatttgatgatg
agtgccttaaaatattctaacattgatattttagctcttgatagactaaatggtttgtat
tcctttaccaagtattttgatgggatttataatcaaggcgaaaactttcatattaaccct
ttttcattagaagatagcgcaactaatagagcctttttattgcatttttatgcccaaatg
gcaaaagtggatagttatgatgaccataaggataaagtagaagatagaacagccctttta
aatgctattgatacgatgtatagaaattataacgatgaagtcaaacaagccaaatttagc
aaccaagaattaccccttccttttgatttaaaagagtttgtcaatgccattgttaaaacc
aatacagacattttagatagtagttttgaagactatttaaaatcttccttattttctagc
cgaatggatagtctagattttaaaactcgtattagcaccataaataccgatagcatttta
cataatgatgatgacgctgggcttttagcctactatgtctttcataagatgattgacaga
gccttaaaaatcaatcgtgggtttttatgctttattgatgagtttaagtcttacgctcaa
aatgaaatgatgaataaaaaaatcaatgaaatcattactcaagctagaaaggctaatggg
gtgattgttctagccttacaagacattaaccaactaagcgaagtgagaaacgctcaaagc
tttataaaaaatatggggcaattgattttgtatccccaaagaaatattgataccaaagat
ttaaacgataaatttggcattagactaagcgatacagaaaaacattttttagaaaacacc
gccgttaatgaatacaaagtcttactcaaaaacatgaatgatggctcatctaacattata
gatgtgagcctaagttctttgggtaattacctacaaatctttagctctaattctagcatg
gtagaacacattgataatctcattaagcattaccctaaaacttggcgagaagtctttgtg
agtaacaaacacgaaaattttgatgacaaaaaacacttagaaaaggtgcttaaatga

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