Helicobacter pylori PeCan18: HPPC18_06465
Help
Entry
HPPC18_06465 CDS
T02036
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hca
Helicobacter pylori PeCan18
Pathway
hca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPPC18_06465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hca03021
]
HPPC18_06465
03400 DNA repair and recombination proteins [BR:
hca03400
]
HPPC18_06465
Enzymes [BR:
hca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPPC18_06465
Transcription machinery [BR:
hca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPPC18_06465
DNA repair and recombination proteins [BR:
hca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPPC18_06465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Enkurin
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
AFI03021
LinkDB
All DBs
Position
complement(1359917..1360951)
Genome browser
AA seq
344 aa
AA seq
DB search
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPVGLK
IEGVHHEFDSLRGVAEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMELR
ARDLNSEHIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSENTRELMPESYMPLDGSF
TPIKNVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSPEQRESLKKRLEKLEDKGGND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgctagagaaagag
ggcaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgctcgct
caccctattagaaggctcttgcttttaagctctgtggggtatgctcctgtgggtttaaag
attgaaggcgtccatcatgagtttgactctttaagaggggttgctgaagacgtgtcgctt
tttatcatgaatttaaagaatatccgctttatagccaaggcgttagtggggcaggatagc
tctttggaaaaccaatcggttgtggtggattattcttttaaagggcctatggagcttagg
gctagggatttgaattctgagcatatagaaatcgtcaatccggaaatgcccctagccacg
atcaacgaagacgctcaattgaatttttcgctcattatctataaaggaatggggtatgtc
ccaagcgaaaacacaagggaattgatgcctgaaagctacatgccgctagacggctctttc
acgccgattaaaaatgtggtttatgagattgaaaatgttttggttgagggcgatcccaac
tatgaaaaaatcatttttgatattgaaacagacgggcagattgacccttataaagcgttt
ttatcagcggtgaaagtgatgagcaagcaactgggcgtttttggcgaaagacccattgct
aacacggagtattcaggcgattacgctcaaagagatgacgctaaagacttgagcgctaag
attgaaagcatgaatttgagcgctaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaattggttttgatgagcgaagaagagcttaagggcgtgaaaaacatgggc
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttgggctatccggtaggcaca
gaattaagccctgaacaaagagagagtttaaagaaaagattagaaaaattagaagataaa
ggaggtaacgactga
DBGET
integrated database retrieval system