KEGG   Helicobacter pylori PeCan18: HPPC18_06465
Entry
HPPC18_06465      CDS       T02036                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
hca  Helicobacter pylori PeCan18
Pathway
hca03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hca00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HPPC18_06465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hca03021]
    HPPC18_06465
   03400 DNA repair and recombination proteins [BR:hca03400]
    HPPC18_06465
Enzymes [BR:hca01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HPPC18_06465
Transcription machinery [BR:hca03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HPPC18_06465
DNA repair and recombination proteins [BR:hca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HPPC18_06465
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L Enkurin Myb_DNA-bind_4
Other DBs
NCBI-ProteinID: AFI03021
LinkDB
Position
complement(1359917..1360951)
AA seq 344 aa
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPVGLK
IEGVHHEFDSLRGVAEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMELR
ARDLNSEHIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSENTRELMPESYMPLDGSF
TPIKNVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSPEQRESLKKRLEKLEDKGGND
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgctagagaaagag
ggcaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgctcgct
caccctattagaaggctcttgcttttaagctctgtggggtatgctcctgtgggtttaaag
attgaaggcgtccatcatgagtttgactctttaagaggggttgctgaagacgtgtcgctt
tttatcatgaatttaaagaatatccgctttatagccaaggcgttagtggggcaggatagc
tctttggaaaaccaatcggttgtggtggattattcttttaaagggcctatggagcttagg
gctagggatttgaattctgagcatatagaaatcgtcaatccggaaatgcccctagccacg
atcaacgaagacgctcaattgaatttttcgctcattatctataaaggaatggggtatgtc
ccaagcgaaaacacaagggaattgatgcctgaaagctacatgccgctagacggctctttc
acgccgattaaaaatgtggtttatgagattgaaaatgttttggttgagggcgatcccaac
tatgaaaaaatcatttttgatattgaaacagacgggcagattgacccttataaagcgttt
ttatcagcggtgaaagtgatgagcaagcaactgggcgtttttggcgaaagacccattgct
aacacggagtattcaggcgattacgctcaaagagatgacgctaaagacttgagcgctaag
attgaaagcatgaatttgagcgctaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaattggttttgatgagcgaagaagagcttaagggcgtgaaaaacatgggc
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttgggctatccggtaggcaca
gaattaagccctgaacaaagagagagtttaaagaaaagattagaaaaattagaagataaa
ggaggtaacgactga

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