Helicobacter pylori PeCan18: HPPC18_06735
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Entry
HPPC18_06735 CDS
T02036
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hca
Helicobacter pylori PeCan18
Pathway
hca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPPC18_06735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hca03400
]
HPPC18_06735
Enzymes [BR:
hca01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPPC18_06735
DNA repair and recombination proteins [BR:
hca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPPC18_06735
Prokaryotic type
HPPC18_06735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFI03075
LinkDB
All DBs
Position
complement(1399400..1400101)
Genome browser
AA seq
233 aa
AA seq
DB search
MKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFCAFNLTPPY
AVKIILLGQDPYHSTYLENEQELPVAMGLSFSVEKNAPIPPSLRNIFKELHANLGVPVPC
CGDLSAWAKRGMLLLNAILSVEKNQAASHKYIGWEAFSDRILIRLFETISPLIVVLLGKV
AQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSVQKAYREVYHKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttttgactacgctcctttgagtttggcttggcgggagtttttgcaaagcgaa
tttaaaaaaccttattttttagagatagaaaaacgctacttagaagccctaaaaagccct
aaaaccattttccctaaaagctctaatctgttttgcgcgttcaatctaacgcccccttat
gcggttaaaatcattcttttagggcaagatccctaccattccacctacctagaaaatgaa
caagaattgccggtggcgatggggttgagctttagcgtggaaaaaaacgcccccatccct
ccaagtttaaggaatatttttaaagaattgcatgcgaatttgggcgtgcctgtgccttgt
tgtggggatttgagcgcatgggctaaaaggggcatgctcttattgaacgccattttaagc
gtggaaaaaaaccaagccgcttcgcacaaatatattggctgggaagcttttagcgatagg
atactgattcgcctttttgaaacgatctcccctttaatcgtggtgctattagggaaagtc
gcccaaaaaaagatcgcgctaatccctaaaaacaaacacatcatcatcacagcccctcac
cctagcccgttatctagggggtttttagggagtggggtttttacaagcgttcaaaaagct
tatagagaggtttatcataaggattttgatttcagtttgtga
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