Helicobacter pylori PeCan18: HPPC18_07205
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Entry
HPPC18_07205 CDS
T02036
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hca
Helicobacter pylori PeCan18
Pathway
hca03420
Nucleotide excision repair
hca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPPC18_07205
03430 Mismatch repair
HPPC18_07205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hca03400
]
HPPC18_07205
Enzymes [BR:
hca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPPC18_07205
DNA repair and recombination proteins [BR:
hca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPPC18_07205
MMR (mismatch excision repair)
Other MMR factors
HPPC18_07205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AFI03165
LinkDB
All DBs
Position
1504451..1506496
Genome browser
AA seq
681 aa
AA seq
DB search
MDFEKSILDNLNGAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLT
LTFTNKASKEMQERALKLLKNQTLIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSDE
VKTLCKQLKISSFRASISQIKNGMIDLSMQDSECYKAYELYQNALKKDNLVDFDDLLFLS
LKILQDNETIAKETSERYHYIMVDEYQDTNALQLEFLKKLSFTHHNLCVVGDDDQSIYGF
RGADISNILNFSKHFKGAKVVKLETNYRSSAEILACANSLISHNQHRHKKTLQSFKGSHK
SVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRL
IGAVSFYERAEVKDALAFMHLVAKKDDRFFIKRVLNKPSRGLGKITQEWIFSLLDGEGLN
LEEALKLGVFKGKLSPKNEHALNKFIAMIGRLREAFEISVEEFCARFLEETNLLKSYEKE
DNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESVLDTHNTENAQKVSCMSVHMSKGL
EFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVQERSYFGRKIS
CSPSVFLEEAKLLKQDNPPKQDHKKDAPIKVGDLIRHKIFGTGRVLGVEKGLSGLCLKIN
CGGNVYDKISAKFVEKVDNGF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaaaaagcattttagacaatttgaacggagcgcaaaaaatcgctgcaagc
cacattcaagggccattgctcattttagcgggagctgggagcggtaagactaagacttta
acgagccgtttagcgtatttgattggcgcttgtggcgtgcctagcgagaacactttaacg
ctcactttcaccaataaagcgagcaaagaaatgcaagaaagggctttgaaattgttgaaa
aaccaaacccttatcccccccttgctttgcactttccatcgttttggtttgctgttttta
aggcagcacatgaaccttttaaaaagagcgtgcgatttttcggtgctagatagcgatgaa
gtaaaaacgctgtgcaaacagctcaaaatttcaagctttagagccagtatttctcagatc
aaaaacggcatgattgatttaagcatgcaagatagcgaatgttataaagcgtatgagctt
tatcaaaacgcgcttaaaaaagacaacttagtggattttgacgatttgctttttttaagc
cttaagattttgcaagataatgaaaccatcgccaaagagactagcgagcgctaccattac
attatggtagatgagtatcaagacacgaacgccttgcaattagaatttttaaaaaaattg
agtttcacgcaccacaatttgtgcgtggtgggcgatgacgatcagagcatttatggtttt
aggggggctgatatttctaacattttaaatttttccaagcattttaaaggggctaaggtg
gtgaaattagaaaccaactaccgctctagcgctgaaattttagcgtgcgctaactccctt
attagccataaccaacaccgccacaaaaaaacgcttcaaagttttaaaggctcgcataaa
agcgtggtttgtaaagaatatttgacgcaaaaagaagagagcttggatgtggcttatcaa
atcaaagcccttttaaagaagggcgaaaatttagaaaatatcgctattttgtaccgctta
aacgggcttagccgcagcattgaagaaagcttgaacgctttgaatatcccctataggctt
attggagcggtaagtttctatgaaagagcagaggttaaagacgctttggcgttcatgcat
ttagtggctaaaaaagacgatcgctttttcattaagcgcgttttaaacaagccctcaaga
ggccttggcaagatcactcaagaatggattttttctcttttagatggtgagggtttgaat
ttagaagaagcgctaaaacttggggtgtttaaaggcaaattaagccctaaaaacgaacac
gctttgaataaatttatcgctatgatagggcgtttgagggaggcttttgaaatttcagta
gaggagttttgcgctcggtttttagaagaaaccaaccttttaaaaagctatgaaaaagaa
gacaattacgaagaaagagagggctttgttaaagagcttttaagcttagtgaaagagcat
tttaaaactaaccccacgcattctttattggattttttgaatgaaagcgttctagatacc
cataatacagaaaacgcgcaaaaagtgagttgcatgagcgtgcatatgagtaaggggtta
gagtttaagcatgtgtttgtgatcgggttagaagaagggtttttcccgcatagggggttc
aatcaagaaagcgatttagaagaagaaaggcgcttggcttacgtagcgatcactagggct
aaagaaggattgcagctctcttatgttcaagagcgttcgtattttgggaggaaaatttct
tgctcgccctctgtgtttttagaagaagccaagttgctcaaacaagacaacccccctaaa
caggatcacaaaaaagatgcgcccattaaagtgggggatttgatcaggcataagattttt
ggcaccggtagggttttaggcgtagaaaaaggcttgagtggtttgtgcttgaaaatcaat
tgcggagggaatgtctatgataaaatctcagcaaaatttgtagaaaaagtggataacggg
ttttga
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